RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 REG4Q9BYZ8 158 aa8.68□□□□□ -1.02
TPM4-207ENST00000588032 NMNAT2Q9BZQ4 307 aa8.68□□□□□ -1.02
TPM4-207ENST00000588032 CYB5R1Q9UHQ9 305 aa8.68□□□□□ -1.02
TPM4-207ENST00000588032 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
TPM4-207ENST00000588032 A0A1W2PPW3 197 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 LOC390937A0A1W2PQ73 354 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ARID1AO14497 2285 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ABHD16AO95870 558 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 IGFBP1P08833 259 aaPredicted RBP8.67□□□□□ -1.02
TPM4-207ENST00000588032 POU1F1P28069 291 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 FMO3P31513 532 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 PDLIM4P50479 330 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ACTR3P61158 418 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 PPP1CBP62140 327 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 CDK5Q00535 292 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 CRMP1Q14194 572 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 GINS1Q14691 196 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 MEP1BQ16820 701 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 NKPD1Q17RQ9 610 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 SLC18B1Q6NT16 456 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 FAHD1Q6P587 224 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ZNF101Q8IZC7 436 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 HS3ST5Q8IZT8 346 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 CIARTQ8N365 385 aaPredicted RBP8.67□□□□□ -1.02
TPM4-207ENST00000588032 PARP8Q8N3A8 854 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 CYB561A3Q8NBI2 242 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ICA1LQ8NDH6 482 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 OR5L1Q8NGL2 311 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 ABHD4Q8TB40 342 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 SNX33Q8WV41 574 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 MARS2Q96GW9 593 aaKnown RBP8.67□□□□□ -1.02
TPM4-207ENST00000588032 OSBPL10Q9BXB5 764 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 OR51B6Q9H340 312 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 FN3KQ9H479 309 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 PAPOLBQ9NRJ5 636 aaKnown RBP8.67□□□□□ -1.02
TPM4-207ENST00000588032 CYSLTR2Q9NS75 346 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 NKIRAS2Q9NYR9 191 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 TAAR3PQ9P1P4 343 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 KIF17Q9P2E2 1029 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 CGGBP1Q9UFW8 167 aaPredicted RBP8.67□□□□□ -1.02
TPM4-207ENST00000588032 ENOPH1Q9UHY7 261 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 LHFPL6Q9Y693 200 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
TPM4-207ENST00000588032 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 TACC2O95359 2948 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 GPANK1O95872 356 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 NGFP01138 241 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 SPI1P17947 270 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 PYCR1P32322 319 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 GGT2P36268 569 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 CRISP1P54107 249 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ERVS71-1P61550 626 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ESRRGP62508 458 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 MRPS11P82912 194 aaKnown RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 PCGF3Q3KNV8 242 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 TEX30Q5JUR7 227 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ZFP1Q6P2D0 407 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 TMEM154Q6P9G4 183 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 LRP11Q86VZ4 500 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ZNF786Q8N393 782 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ZNF525Q8N782 197 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 SLC25A40Q8TBP6 338 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 KLF14Q8TD94 323 aaPredicted RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 C10orf105Q8TEF2 133 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 UBASH3BQ8TF42 649 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 APOBEC3DQ96AK3 386 aaPredicted RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 CENPNQ96H22 339 aaPredicted RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 RAB3IPQ96QF0 476 aaPredicted RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 PITX2Q99697 317 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 ATF6BQ99941 703 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 PRRG3Q9BZD7 231 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 OR2J1Q9GZK6 312 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 SLC25A19Q9HC21 320 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 HINT3Q9NQE9 182 aaKnown RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 MRPL22Q9NWU5 206 aaKnown RBP8.66□□□□□ -1.02
TPM4-207ENST00000588032 FZR1Q9UM11 496 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 GRIP1Q9Y3R0 1128 aa8.66□□□□□ -1.02
TPM4-207ENST00000588032 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 PLSCR5A0PG75 271 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 PRR23D1E9PI22 279 aaPredicted RBP8.65□□□□□ -1.02
TPM4-207ENST00000588032 SMAD7O15105 426 aaKnown RBP8.65□□□□□ -1.02
TPM4-207ENST00000588032 SURF4O15260 269 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 CLPTM1O96005 669 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 PRR23D2P0DMB1 279 aaPredicted RBP8.65□□□□□ -1.02
TPM4-207ENST00000588032 DAOP14920 347 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 ZNF23P17027 643 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 GIFP27352 417 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 ENTPD1P49961 510 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 DAPP51397 102 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 LOXL1Q08397 574 aaPredicted RBP8.65□□□□□ -1.02
TPM4-207ENST00000588032 PCK2Q16822 640 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 KRTAP27-1Q3LI81 207 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 ZMAT1Q5H9K5 638 aa8.65□□□□□ -1.02
TPM4-207ENST00000588032 FAM209AQ5JX71 171 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms