RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 PCDHGB1Q9Y5G3 927 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 INSIG2Q9Y5U4 225 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 PKD1L1Q8TDX9 2849 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 TEX13CA0A0J9YWL9 993 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 DNAJC9-AS1A6NH13 148 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 F5H0A9 414 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-216ENST00000586813 XKRYO14609 159 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 SURF4O15260 269 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 AHCYL1O43865 530 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 CTLA4P16410 223 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF26P17031 533 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-216ENST00000586813 PRTN3P24158 256 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 ERFP50548 548 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 SF3A3Q12874 501 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■□□ 14.7
TRAF4-216ENST00000586813 FOXL1Q12952 345 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 SLC7A6Q92536 515 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 HAVCR1Q96D42 359 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 COG8Q96MW5 612 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 OR2V2Q96R30 315 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 MRI1Q9BV20 369 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF747Q9BV97 191 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 FGFR1OP2Q9NVK5 253 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 CMTM6Q9NX76 183 aa16.28■□□□□ 0.2
TRAF4-216ENST00000586813 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF682O95780 498 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 MDH2P40926 338 aaKnown RBP16.27■□□□□ 0.2
TRAF4-216ENST00000586813 MMP16P51512 607 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 GUCY1A3Q02108 690 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 ZBED5Q49AG3 693 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 ESCO2Q56NI9 601 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 PRR31Q5SQ13 230 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 CGB2Q6NT52 195 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 C1orf94Q6P1W5 598 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 TBPL2Q6SJ96 375 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 TMPRSS11FQ6ZWK6 438 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 BCL6BQ8N143 479 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-216ENST00000586813 RCN3Q96D15 328 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 C1orf147Q96MC9 270 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-216ENST00000586813 DUX5Q96PT3 197 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 GPA33Q99795 319 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 NDEL1Q9GZM8 345 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 ZMAT3Q9HA38 289 aaKnown RBP16.27■□□□□ 0.2
TRAF4-216ENST00000586813 ASH2LQ9UBL3 628 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 OR5V1Q9UGF6 321 aa16.27■□□□□ 0.2
TRAF4-216ENST00000586813 OR6C6A6NF89 314 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 TMEM178BH3BS89 294 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 TMPRSS2O15393 492 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 KRR1Q13601 381 aaKnown RBP16.26■□□□□ 0.19
TRAF4-216ENST00000586813 IFI44LQ53G44 452 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 OTPQ5XKR4 325 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 SHISA2Q6UWI4 295 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 ARPINQ7Z6K5 226 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 MUC20Q8N307 709 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-216ENST00000586813 RASD2Q96D21 266 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 ZNF48Q96MX3 618 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-216ENST00000586813 C1QTNF5Q9BXJ0 243 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 GCM1Q9NP62 436 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 AP3M1Q9Y2T2 418 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 CAPN7Q9Y6W3 813 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 DOCK11Q5JSL3 2073 aa16.26■□□□□ 0.19
TRAF4-216ENST00000586813 CEACAM18A8MTB9 384 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 J3QW42 95 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 CXCR6O00574 342 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 RAC2P15153 192 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 LSM6P62312 80 aaKnown RBP16.25■□□□□ 0.19
TRAF4-216ENST00000586813 LIPEQ05469 1076 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 CBLL1Q75N03 491 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 GLB1L2Q8IW92 636 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 OR5AS1Q8N127 324 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 OR1F12Q8NHA8 337 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 PTP4A1Q93096 173 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 HSH2DQ96JZ2 352 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 SYT4Q9H2B2 425 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 ANKRD19PQ9H560 264 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 RERGLQ9H628 205 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 TMEM5Q9Y2B1 443 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 LRCH1Q9Y2L9 728 aa16.25■□□□□ 0.19
TRAF4-216ENST00000586813 TRRAPQ9Y4A5 3859 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 SLC16A7O60669 478 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 DBHP09172 617 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 SDHAP31040 664 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 BAMBIQ13145 260 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 HLXQ14774 488 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-216ENST00000586813 CCDC92Q53HC0 331 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-216ENST00000586813 FBXW12Q6X9E4 464 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 FKBP9P1Q75LS8 142 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 RRM2BQ7LG56 351 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 SLC15A3Q8IY34 581 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 POU5F2Q8N7G0 328 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 ATG16L2Q8NAA4 619 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 OR10AD1Q8NGE0 317 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 SLC7A13Q8TCU3 470 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 FAM46AQ96IP4 442 aaKnown RBP16.24■□□□□ 0.19
TRAF4-216ENST00000586813 NMNAT1Q9HAN9 279 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-216ENST00000586813 ARMCX1Q9P291 453 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 ATPIF1Q9UII2 106 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 SIGLEC7Q9Y286 467 aa16.24■□□□□ 0.19
TRAF4-216ENST00000586813 COA3Q9Y2R0 106 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-216ENST00000586813 IFNL4K9M1U5 179 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms