RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RHOUQ7L0Q8 258 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 WFDC11Q8NEX6 87 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 OR1J1Q8NGS3 322 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 OR1F12Q8NHA8 337 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 PLEKHA8Q96JA3 519 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 CIB1Q99828 191 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 RBM4BQ9BQ04 359 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 EMC7Q9NPA0 242 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 CYSLTR2Q9NS75 346 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 KRT84Q9NSB2 600 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 TMEFF2Q9UIK5 374 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 ARFGEF3Q5TH69 2177 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 DCTN6O00399 190 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 EI24O14681 340 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 SURF4O15260 269 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 GPRIN2O60269 458 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 ABHD16AO95870 558 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 F12P00748 615 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 IGHV4-39P01824 125 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC25A16P16260 332 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 SPI1P17947 270 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 CCNOP22674 350 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 IGFBP5P24593 272 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 CRISP1P54107 249 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 RCN1Q15293 331 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 PCK2Q16822 640 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC18B1Q6NT16 456 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF774Q6NX45 483 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 SHFQ7M4L6 423 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 OR5L1Q8NGL2 311 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 Q96MF0 132 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 TSSK2Q96PF2 358 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 DIRC2Q96SL1 478 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 MRPL37Q9BZE1 423 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 DLL4Q9NR61 685 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 NKIRAS2Q9NYR9 191 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
PRKCSH-202ENST00000585540 TACC2O95359 2948 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 LOC100509620A0A075B734 347 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 A0A1W2PPW3 197 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 GLCEO94923 617 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 IGHV3-13P01766 116 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 SCG5P05408 212 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 GGT2P36268 569 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 ENTPD1P49961 510 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 PDLIM4P50479 330 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 ELF3P78545 371 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 MRPS11P82912 194 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 GINS1Q14691 196 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 LCN1P1Q5VSP4 162 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 TMEM236Q5W0B7 351 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 OTPQ5XKR4 325 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 ACSM5Q6NUN0 579 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 APOBEC3DQ96AK3 386 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 COX4I2Q96KJ9 171 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 ATF6BQ99941 703 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 RHNO1Q9BSD3 238 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 SP140LQ9H930 580 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 MARCH7Q9H992 704 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 DDX28Q9NUL7 540 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 GDF2Q9UK05 429 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
PRKCSH-202ENST00000585540 F8P00451 2351 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 OTOGQ6ZRI0 2925 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 GPANK1O95872 356 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 APOC1P02654 83 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 TFP02787 698 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 FAM157BP0CG42 384 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 CCL2P13500 99 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 ANPEPP15144 967 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 EPHA2P29317 976 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 WNT5AP41221 380 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 PPP1CBP62140 327 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF771Q7L3S4 317 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 PAQR4Q8N4S7 273 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 CBR4Q8N4T8 237 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 ABHD4Q8TB40 342 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 SORCS2Q96PQ0 1159 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 TOR3AQ9H497 397 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 OPA3Q9H6K4 179 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 MRPL22Q9NWU5 206 aaKnown RBP11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 USE1Q9NZ43 259 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 ORC6Q9Y5N6 252 aa11.86□□□□□ -0.51
PRKCSH-202ENST00000585540 LOC390937A0A1W2PQ73 354 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 PLSCR5A0PG75 271 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms