RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 FSTL3O95633 263 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 IFNW1P05000 195 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 CD14P08571 375 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 PPIAL4GP0DN37 164 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 RAC2P15153 192 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 ZNF12P17014 697 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 PRTN3P24158 256 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 LSM6P62312 80 aaKnown RBP12.65□□□□□ -0.38
VAPA-209ENST00000585042 ZNF154Q13106 437 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 NRMQ8IXM6 262 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 CLDN22Q8N7P3 220 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 DCLRE1CQ96SD1 692 aaKnown RBP12.65□□□□□ -0.38
VAPA-209ENST00000585042 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 ANKRD19PQ9H560 264 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 ZNF696Q9H7X3 374 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 IL20RAQ9UHF4 553 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 PPP1R3CQ9UQK1 317 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
VAPA-209ENST00000585042 TRAPPC2LH3BP13 241 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 XKRYO14609 159 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 GSTA4O15217 222 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 SCG5P05408 212 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MDH2P40926 338 aaKnown RBP12.64□□□□□ -0.39
VAPA-209ENST00000585042 RGS6P49758 472 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MNAT1P51948 309 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 BTG1P62324 171 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 AQP6Q13520 282 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 ZBED5Q49AG3 693 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 ARMCX4Q5H9R4 360 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 Q6ZR03 302 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MBOAT2Q6ZWT7 520 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 VASH1Q7L8A9 365 aaPredicted RBP12.64□□□□□ -0.39
VAPA-209ENST00000585042 RRM2BQ7LG56 351 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 IGFN1Q86VF2 1251 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MUC20Q8N307 709 aaPredicted RBP12.64□□□□□ -0.39
VAPA-209ENST00000585042 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 MGAM2Q2M2H8 2515 aa12.64□□□□□ -0.39
VAPA-209ENST00000585042 A0A087WUU8 490 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 PRSS37A4D1T9 235 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 CLDN34H7C241 214 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 FFAR1O14842 300 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 DOK2O60496 412 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 GMNNO75496 209 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 FAM107AO95990 144 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 RPL4P36578 427 aaKnown RBP12.63□□□□□ -0.39
VAPA-209ENST00000585042 HTR5AP47898 357 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 LIPEQ05469 1076 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 PAX8Q06710 450 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 ZNF730Q6ZMV8 503 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 SLC15A3Q8IY34 581 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 SIGLECL1Q8N7X8 197 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 C22orf15Q8WYQ4 148 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 NMNAT1Q9HAN9 279 aaPredicted RBP12.63□□□□□ -0.39
VAPA-209ENST00000585042 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 CMTM6Q9NX76 183 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 NDE1Q9NXR1 346 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 TMEM5Q9Y2B1 443 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 LRCH1Q9Y2L9 728 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
VAPA-209ENST00000585042 OR6C6A6NF89 314 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 WIPF1O43516 503 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 WNT2P09544 360 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 SLC7A2P52569 658 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 PSME3P61289 254 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 ZMYND11Q15326 602 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 KCNMB1Q16558 191 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
VAPA-209ENST00000585042 FBXW12Q6X9E4 464 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 OR13C2Q8NGS9 318 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 ITLN1Q8WWA0 313 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 RASD2Q96D21 266 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 Q96M85 177 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 KCTD14Q9BQ13 255 aaPredicted RBP12.62□□□□□ -0.39
VAPA-209ENST00000585042 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 EMC7Q9NPA0 242 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 ZNF69Q9UC07 566 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 SNX13Q9Y5W8 968 aa12.62□□□□□ -0.39
VAPA-209ENST00000585042 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms