RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 RADILQ96JH8 1075 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 WACQ9BTA9 647 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 LIME1Q9H400 295 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 B3GNT2Q9NY97 397 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 UBAP1Q9NZ09 502 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 CYB5R1Q9UHQ9 305 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 RPL36Q9Y3U8 105 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 LHFPL6Q9Y693 200 aa13.89□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 ATE1O95260 518 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 SPARCP09486 303 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF32P17041 273 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 RPS27P42677 84 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 SLC15A1P46059 708 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 CAPZA2P47755 286 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 CXCR4P61073 352 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 PIGFQ07326 219 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 AQP6Q13520 282 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 SLC16A9Q7RTY1 509 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 PLCXD1Q9NUJ7 323 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 EXOGQ9Y2C4 368 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 POLR1DQ9Y2S0 133 aa13.88□□□□□ -0.19
CSNK1D-223ENST00000584472 J3QRE1 110 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 HS3ST1O14792 307 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 TMCC2O75069 709 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 APOL3O95236 402 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 CD79AP11912 226 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 FOSL1P15407 271 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 CD40P25942 277 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 PCBD1P61457 104 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 RAB1AP62820 205 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 HIST1H3AP68431 136 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 HIST2H3PS2Q5TEC6 136 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 CORO6Q6QEF8 472 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 HIST2H3AQ71DI3 136 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 SHFQ7M4L6 423 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 OR4F15Q8NGB8 312 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 RNF121Q9H920 327 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 UBTD1Q9HAC8 227 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 CCNB1IP1Q9NPC3 277 aa13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 BEX4Q9NWD9 120 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-223ENST00000584472 M0R1B8 84 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 SLC1A7O00341 560 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ABCD4O14678 606 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 XPNPEP2O43895 674 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 FAM20BO75063 409 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 PLAUP00749 431 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 IGLV1-44P01699 117 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ATP6V1E1P36543 226 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ARR3P36575 388 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 HCCSP53701 268 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 CSNK2BP67870 215 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 PSG4Q00888 419 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 SCRN3Q0VDG4 424 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 RAB40BQ12829 278 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 DEFB113Q30KQ7 82 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF672Q499Z4 452 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 KLHL22Q53GT1 634 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 CFAP77Q6ZQR2 320 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 MDP1Q86V88 176 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF611Q8N823 705 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 GJC3Q8NFK1 279 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 OR2AJ1Q8NGZ0 328 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 OTOSQ8NHW6 89 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 MAP6Q96JE9 813 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF75AQ96N20 296 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 MNTQ99583 582 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 RHNO1Q9BSD3 238 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 C1QTNF6Q9BXI9 259 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 C1orf198Q9H425 327 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 GDF2Q9UK05 429 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 PLEKHA6Q9Y2H5 1048 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 TIMM10BQ9Y5J6 103 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ZFHX3Q15911 3703 aa13.86□□□□□ -0.19
CSNK1D-223ENST00000584472 ZNF469Q96JG9 3925 aaPredicted RBP13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 SHISA9B4DS77 424 aa13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 RER1O15258 196 aa13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 IGKV3-15P01624 115 aa13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 CCDC159P0C7I6 412 aa13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 OR2T7P0C7T2 308 aa13.85□□□□□ -0.19
CSNK1D-223ENST00000584472 CD99P14209 185 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms