RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 LIPAP38571 399 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 PROKR2Q8NFJ6 384 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 OR8D4Q8NGM9 314 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 MARS2Q96GW9 593 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 NIPSNAP1Q9BPW8 284 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 OR2J1Q9GZK6 312 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 CYSLTR2Q9NS75 346 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 CGGBP1Q9UFW8 167 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 A0A096LNT2 108 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 PLSCR5A0PG75 271 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 C17orf100A8MU93 164 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 H3BN98 237 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 J3QW42 95 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 RER1O15258 196 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 TLX2O43763 284 aaPredicted RBP23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 SOX14O95416 240 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 ZNF823P16415 610 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 ELFN2Q5R3F8 820 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 RFPL4BQ6ZWI9 263 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 KLF14Q8TD94 323 aaPredicted RBP23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 COQ7Q99807 217 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 FN3KQ9H479 309 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 GRIP1Q9Y3R0 1128 aa23.26■■□□□ 1.31
SMARCD2-210ENST00000584400 GPANK1O95872 356 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 ANXA8P13928 327 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 GIFP27352 417 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 RGS6P49758 472 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 HIST1H3AP68431 136 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 MRPS11P82912 194 aaKnown RBP23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 MEP1BQ16820 701 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 ALKBH6Q3KRA9 238 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 CCDC92Q53HC0 331 aaPredicted RBP23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 SPATA46Q5T0L3 261 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 HIST2H3PS2Q5TEC6 136 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 OTPQ5XKR4 325 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 HIST2H3AQ71DI3 136 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 SLC37A3Q8NCC5 494 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 RDH5Q92781 318 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 ARMC1Q9NVT9 282 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 NKIRAS2Q9NYR9 191 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 LHFPL6Q9Y693 200 aa23.25■■□□□ 1.31
SMARCD2-210ENST00000584400 ARFGEF3Q5TH69 2177 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 RIIAD1A6NNX1 92 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 CD5LO43866 347 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 DEAF1O75398 565 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 NGFP01138 241 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 TFP02787 698 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 ZNF3P17036 446 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 BLVRAP53004 296 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 ECH1Q13011 328 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 GGTLC2Q14390 218 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 TMEM249Q2WGJ8 235 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 ZMAT1Q5H9K5 638 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 CYB561A3Q8NBI2 242 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 OR5L1Q8NGL2 311 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 DDOQ99489 341 aa23.24■■□□□ 1.31
SMARCD2-210ENST00000584400 ZNF362Q5T0B9 420 aaPredicted RBP23.23■■□□□ 1.31
SMARCD2-210ENST00000584400 OR4Q3Q8NH05 313 aa23.23■■□□□ 1.31
SMARCD2-210ENST00000584400 NRBF2Q96F24 287 aa23.23■■□□□ 1.31
SMARCD2-210ENST00000584400 BPESC1Q9GZL8 116 aa23.23■■□□□ 1.31
SMARCD2-210ENST00000584400 CHODLQ9H9P2 273 aa23.23■■□□□ 1.31
SMARCD2-210ENST00000584400 ACHEP22303 614 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 ZNF81P51508 661 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 SLC25A1P53007 311 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 KRTAP1-1Q07627 177 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 CRMP1Q14194 572 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 FAM209AQ5JX71 171 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 C1orf146Q5VVC0 180 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 SLC18B1Q6NT16 456 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 SLC27A4Q6P1M0 643 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 ATG16L2Q8NAA4 619 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 DNAJC9Q8WXX5 260 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 PITX2Q99697 317 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 RBM4Q9BWF3 364 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 TEX12Q9BXU0 123 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 DECR2Q9NUI1 292 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 CYB5R1Q9UHQ9 305 aa23.22■■□□□ 1.31
SMARCD2-210ENST00000584400 HPXP02790 462 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 FMO3P31513 532 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 PYCR1P32322 319 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 GRK5P34947 590 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 MPV17P39210 176 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 GZMKP49863 264 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 CYB5R2Q6BCY4 276 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 CORO6Q6QEF8 472 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 TMEM179BQ7Z7N9 219 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 DIRC2Q96SL1 478 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 CMC2Q9NRP2 79 aa23.21■■□□□ 1.31
SMARCD2-210ENST00000584400 MTORP42345 2549 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 TPD52L2O43399 206 aaKnown RBP23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 CIB2O75838 187 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 OSMP13725 252 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 GGT2P36268 569 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 ERFP50548 548 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 TMEM33P57088 247 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 SHQ1Q6PI26 577 aaKnown RBP23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 PTP4A1Q93096 173 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 APOBEC3DQ96AK3 386 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 SLCO4A1Q96BD0 722 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 ATF6BQ99941 703 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms