RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, human

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-208	ENST00000584052	BNIP1	Q12981	228 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	FGD3	Q5JSP0	725 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	MBNL2	Q5VZF2	373 aa	Known RBP	12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	TMPRSS11F	Q6ZWK6	438 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	RRM2B	Q7LG56	351 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	ZDHHC21	Q8IVQ6	265 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	KLHL36	Q8N4N3	616 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	CLPTM1L	Q96KA5	538 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	FUZ	Q9BT04	418 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	THTPA	Q9BU02	230 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	OR2H1	Q9GZK4	316 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	MAGIX	Q9H6Y5	334 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	PPIAL4A	Q9Y536	164 aa		12.84	□□□□□ -0.35
RIOK3-208	ENST00000584052	TRBV4-1	A0A0J9YWV2	114 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052		A6NIZ1	184 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	GYG2	O15488	501 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	GADD45G	O95257	159 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	ABHD16A	O95870	558 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	NGF	P01138	241 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	IGHM	P01871	453 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	CST2	P09228	141 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	GSTM3	P21266	225 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	MAGEA2	P43356	314 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	GPR4	P46093	362 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	RAP1B	P61224	184 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	RAP1A	P62834	184 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	MS4A2	Q01362	244 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	SPIB	Q01892	262 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	TRAP1	Q12931	704 aa	Known RBP	12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	FHL1	Q13642	323 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	ARMCX4	Q5H9R4	360 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	ZNF774	Q6NX45	483 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	PGM2L1	Q6PCE3	622 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	SLC25A47	Q6Q0C1	308 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	TBPL2	Q6SJ96	375 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	IGFN1	Q86VF2	1251 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	OR2Z1	Q8NG97	314 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	OR51A7	Q8NH64	312 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	CCDC124	Q96CT7	223 aa	Known RBP	12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	SEPHS2	Q99611	448 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	BTBD10	Q9BSF8	475 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	ALG12	Q9BV10	488 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	TRIM15	Q9C019	465 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	UGT2A1	Q9Y4X1	527 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	NPTN	Q9Y639	398 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	DYSF	O75923	2080 aa		12.83	□□□□□ -0.36
RIOK3-208	ENST00000584052	IGKV1D-43	A0A0B4J1Z2	117 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	ZSCAN5B	A6NJL1	495 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	CDC42EP2	O14613	210 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	ACOT8	O14734	319 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	EGR1	P18146	543 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	TNFRSF1A	P19438	455 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	RPL4	P36578	427 aa	Known RBP	12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	OMP	P47874	163 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	ZNF133	P52736	654 aa	Predicted RBP	12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	SEC23B	Q15437	767 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	FAM205BP	Q63HN1	556 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	OAF	Q86UD1	273 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	SPIC	Q8N5J4	248 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	LRRC75A	Q8NAA5	344 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	OR13C2	Q8NGS9	318 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	NABP1	Q96AH0	204 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	GPA33	Q99795	319 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	WNT5B	Q9H1J7	359 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	GRHPR	Q9UBQ7	328 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	NDRG4	Q9ULP0	352 aa	Known RBP	12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	AUP1	Q9Y679	476 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	ANK2	Q01484	3957 aa		12.82	□□□□□ -0.36
RIOK3-208	ENST00000584052	TRAV27	A0A087WT01	109 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	XKRY	O14609	159 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	SURF4	O15260	269 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	DNAJC8	O75937	253 aa	Predicted RBP	12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	MSR1	P21757	451 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	RRM2	P31350	389 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	FOXL1	Q12952	345 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	ZBED5	Q49AG3	693 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	AWAT1	Q58HT5	328 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	C1orf94	Q6P1W5	598 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	RFPL4B	Q6ZWI9	263 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	CLDN22	Q8N7P3	220 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	FAM46A	Q96IP4	442 aa	Known RBP	12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	LRGUK	Q96M69	825 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	MRI1	Q9BV20	369 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	NDEL1	Q9GZM8	345 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	RERGL	Q9H628	205 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	TMEM106B	Q9NUM4	274 aa		12.81	□□□□□ -0.36
RIOK3-208	ENST00000584052	AQP12B	A6NM10	295 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052		H3BSA7	217 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	ATP5H	O75947	161 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	HTR5A	P47898	357 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	RASSF2	P50749	326 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	UBA52	P62987	128 aa	Known RBP	12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	PSG7	Q13046	419 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	FAM98B	Q52LJ0	330 aa	Known RBP	12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	SYT9	Q86SS6	491 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	AQP12A	Q8IXF9	295 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	SIGLECL1	Q8N7X8	197 aa		12.8	□□□□□ -0.36
RIOK3-208	ENST00000584052	ZDHHC22	Q8N966	263 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms