RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NUAK2Q9H093 628 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 FN3KQ9H479 309 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 SRA1Q9HD15 236 aaKnown RBP13.41□□□□□ -0.26
SKA2-209ENST00000583976 KRT84Q9NSB2 600 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 TMEM38BQ9NVV0 291 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 VSX1Q9NZR4 365 aaPredicted RBP13.41□□□□□ -0.26
SKA2-209ENST00000583976 UGT2A1Q9Y4X1 527 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 SYNGR3O43761 229 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 VENTXO95231 258 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 RENP00797 406 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 ZNF35P13682 527 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 CTLA4P16410 223 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 CENPAP49450 140 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 ZNF133P52736 654 aaPredicted RBP13.4□□□□□ -0.26
SKA2-209ENST00000583976 DVL1P1P54792 670 aaPredicted RBP13.4□□□□□ -0.26
SKA2-209ENST00000583976 GINS1Q14691 196 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 TMEM236Q5W0B7 351 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 ZNF584Q8IVC4 421 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 SKA3Q8IX90 412 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 PQLC1Q8N2U9 271 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 LNX2Q8N448 690 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 CYB561A3Q8NBI2 242 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 SEMA6DQ8NFY4 1073 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 GABARAPL1Q9H0R8 117 aa13.4□□□□□ -0.26
SKA2-209ENST00000583976 METTL17Q9H7H0 456 aaPredicted RBP13.4□□□□□ -0.26
SKA2-209ENST00000583976 RPRD1BQ9NQG5 326 aaKnown RBP13.4□□□□□ -0.26
SKA2-209ENST00000583976 OR6C68A6NDL8 312 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 DCTN6O00399 190 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 AHCYL1O43865 530 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 OR8G3PP0DMU2 310 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 NAT2P11245 290 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 GPR6P46095 362 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 CRISP1P54107 249 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 RAB39AQ14964 217 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 KDM4DQ6B0I6 523 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 SLC27A4Q6P1M0 643 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 DNAJC9Q8WXX5 260 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 ZNF275Q9NSD4 429 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 FBXO9Q9UK97 447 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
SKA2-209ENST00000583976 COA3Q9Y2R0 106 aaPredicted RBP13.39□□□□□ -0.27
SKA2-209ENST00000583976 A0A1W2PPW3 197 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 KHDRBS3O75525 346 aaKnown RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 FARS2O95363 451 aaKnown RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 RAB36O95755 333 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 GPANK1O95872 356 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 SCG5P05408 212 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 COL8A2P25067 703 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 CRMP1Q14194 572 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 RCN1Q15293 331 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 ZNF362Q5T0B9 420 aaPredicted RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 GLCCI1Q86VQ1 547 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 CCDC36Q8IYA8 594 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 OR6V1Q8N148 313 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 SLC37A3Q8NCC5 494 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 IL17RDQ8NFM7 739 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 OTULINQ96BN8 352 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 RBM4BQ9BQ04 359 aaKnown RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 RBM4Q9BWF3 364 aaKnown RBP13.38□□□□□ -0.27
SKA2-209ENST00000583976 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 RNF121Q9H920 327 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 TREM2Q9NZC2 230 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 KLHL21Q9UJP4 597 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 B9D1Q9UPM9 204 aa13.38□□□□□ -0.27
SKA2-209ENST00000583976 RIIAD1A6NNX1 92 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 VSTM5A8MXK1 200 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 B4DSR2 109 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 EI24O14681 340 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 RP2O75695 350 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 MPZL1O95297 269 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 IFNGP01579 166 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 MSMBP08118 114 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 FAM157BP0CG42 384 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 CCL2P13500 99 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 ANPEPP15144 967 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 LAP3P28838 519 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 EPHA2P29317 976 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 CRABP1P29762 137 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 GRK5P34947 590 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 GLRXP35754 106 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 POLR2IP36954 125 aaKnown RBP13.37□□□□□ -0.27
SKA2-209ENST00000583976 MAGEB1P43366 347 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 RAB1AP62820 205 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 MRPS34P82930 218 aaKnown RBP13.37□□□□□ -0.27
SKA2-209ENST00000583976 CDK5Q00535 292 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 PTGES3Q15185 160 aaKnown RBP13.37□□□□□ -0.27
SKA2-209ENST00000583976 DNM1P34Q6PK57 102 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms