RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PSG4Q00888 419 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 EGR3Q06889 387 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SCRN3Q0VDG4 424 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF684Q5T5D7 378 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TMEM154Q6P9G4 183 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF322Q6U7Q0 402 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CFAP77Q6ZQR2 320 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 EGFL6Q8IUX8 553 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 STEAP2Q8NFT2 490 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR10S1Q8NGN2 331 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ITLN2Q8WWU7 325 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ALG8Q9BVK2 526 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR10A4Q9H209 315 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RNF121Q9H920 327 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PNRC2Q9NPJ4 139 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ERGIC3Q9Y282 383 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SNX5Q9Y5X3 404 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR5H1A6NKK0 313 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 FAM90A27PA6NNH2 459 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MAGEB4O15481 346 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZG16O60844 167 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 UBL3O95164 117 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CD79AP11912 226 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 UGT2B10P36537 528 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ARR3P36575 388 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MAP2K4P45985 399 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 UBE2NP61088 152 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RAB1AP62820 205 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ROM1Q03395 351 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 EMX1Q04741 257 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CDONQ4KMG0 1287 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TMEM53Q6P2H8 277 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KCTD18Q6PI47 426 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RHOUQ7L0Q8 258 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 P2RY8Q86VZ1 359 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF808Q8N4W9 903 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR52N5Q8NH56 324 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SNX33Q8WV41 574 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RNF133Q8WVZ7 376 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 NANOS1Q8WY41 292 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RNASE6Q93091 150 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SLAMF6Q96DU3 332 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR8B4Q96RC9 309 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MYCBPQ99417 103 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 USB1Q9BQ65 265 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR2H1Q9GZK4 316 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 WNT5BQ9H1J7 359 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OBP2BQ9NPH6 170 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KCNJ16Q9NPI9 418 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SLCO1C1Q9NYB5 712 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CAB39Q9Y376 341 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 APCP25054 2843 aa14.26□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OTOGQ6ZRI0 2925 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TMEM129A0AVI4 362 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 NKX2-6A6NCS4 301 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 METTL15A6NJ78 407 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SULT1C4O75897 302 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SMIM18P0DKX4 95 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PCMT1P22061 227 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CAPZA2P47755 286 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR12D2P58182 307 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TUBA1BP68363 451 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TUBA4AP68366 448 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ELFN2Q5R3F8 820 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TIMM23BQ5SRD1 257 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 C1QTNF12Q5T7M4 302 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 DEGS2Q6QHC5 323 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TMPRSS11AQ6ZMR5 421 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PLEKHG7Q6ZR37 379 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TUBA1AQ71U36 451 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KCTD20Q7Z5Y7 419 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF679Q8IYX0 411 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KLHL36Q8N4N3 616 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SVOPQ8N4V2 548 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR52N1Q8NH53 320 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 AKR7LQ8NHP1 331 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MARVELD3Q96A59 401 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MRPL48Q96GC5 212 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF75AQ96N20 296 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TTTY10Q9BZA0 68 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ISG20L2Q9H9L3 353 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ELOVL3Q9HB03 270 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 NOX3Q9HBY0 568 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ACOT13Q9NPJ3 140 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CENPMQ9NSP4 180 aa14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MRM2Q9UI43 246 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-228ENST00000583363 A0A1W2PR80 420 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 J3QLW9 94 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PSMD9O00233 223 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SGCEO43556 437 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SYNGR3O43761 229 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF254O75437 659 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CLDN14O95500 239 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 WNT11O96014 354 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PTHP01270 115 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CBR1P16152 277 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF19P17023 458 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms