RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 OR4D11Q8NGI4 311 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 OR6T1Q8NGN1 323 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 VANGL1Q8TAA9 524 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-215ENST00000583328 ABHD4Q8TB40 342 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 HIST1H2ACQ93077 130 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 MCUR1Q96AQ8 359 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 UPRTQ96BW1 309 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 CCDC124Q96CT7 223 aaKnown RBP10.33□□□□□ -0.76
TOP3A-215ENST00000583328 ASB9Q96DX5 294 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 HSH2DQ96JZ2 352 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 CLPTM1LQ96KA5 538 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 SAMD8Q96LT4 415 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 ZNF347Q96SE7 839 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 MCHR1Q99705 422 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 WFDC6Q9BQY6 131 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 CADM1Q9BY67 442 aaKnown RBP10.33□□□□□ -0.76
TOP3A-215ENST00000583328 NANSQ9NR45 359 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 C1RLQ9NZP8 487 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 TRAV40A0A0B4J280 105 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 SRRM5B3KS81 715 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 GSC2O15499 205 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 TPST2O60704 377 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 NDUFA7O95182 113 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 ZNF32P17041 273 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 TNFRSF1AP19438 455 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 TNFRSF1BP20333 461 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 ATP6V1B2P21281 511 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 TRAP1Q12931 704 aaKnown RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 NPTX1Q15818 432 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 ZNF74Q16587 644 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 ASPHD2Q6ICH7 369 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 VTCN1Q7Z7D3 282 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 DHFR2Q86XF0 187 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 RBM45Q8IUH3 476 aaKnown RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 OR10S1Q8NGN2 331 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 SLC30A2Q9BRI3 323 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 POLR2J2Q9GZM3 115 aaKnown RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 POLR2J3Q9H1A7 115 aaKnown RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 MMADHCQ9H3L0 296 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-215ENST00000583328 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 LRCH1Q9Y2L9 728 aa10.32□□□□□ -0.76
TOP3A-215ENST00000583328 LOC100509620A0A075B734 347 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 CPSF4LA6NMK7 179 aaKnown RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 CEACAM18A8MTB9 384 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 MCIDASD6RGH6 385 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 H3BSA7 217 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 IFNW1P05000 195 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 WNT2P09544 360 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 UMPSP11172 480 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 SELEP16581 610 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 CDAP32320 146 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 MDH2P40926 338 aaKnown RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 OR1E2P47887 323 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 ARHGDIAP52565 204 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 KRTAP10-3P60369 221 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 RELBQ01201 579 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 MS4A2Q01362 244 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 CDK5R2Q13319 367 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 HLXQ14774 488 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 TAF11Q15544 211 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 SGCAQ16586 387 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 TAF9Q16594 264 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 HIST3H3Q16695 136 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 ENTPD8Q5MY95 495 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 FAM205BPQ63HN1 556 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 ZNF613Q6PF04 617 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 TTC33Q6PID6 262 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 CYP2R1Q6VVX0 501 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 BRD3OSQ6XYD6 125 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 RFPL4BQ6ZWI9 263 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 FKBP9P1Q75LS8 142 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 ZER1Q7Z7L7 766 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 MUC20Q8N307 709 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 OR2Z1Q8NG97 314 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 FAM110DQ8TAY7 271 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 RAB40AQ8WXH6 277 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-215ENST00000583328 TRIM15Q9C019 465 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 PRDM13Q9H4Q3 707 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 MARCH7Q9H992 704 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 ELOVL3Q9HB03 270 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 PPP1R3CQ9UQK1 317 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 RNF114Q9Y508 228 aa10.31□□□□□ -0.76
TOP3A-215ENST00000583328 IGHV2-70DA0A0C4DH43 119 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 A0A1W2PRG6 482 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 TRAPPC13A5PLN9 417 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 SLC22A31A6NKX4 558 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 BLOC1S5-TXNDC5H3BN57 136 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 KPNA4O00629 521 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-215ENST00000583328 ACOT8O14734 319 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 CHP2O43745 196 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 TRMUO75648 421 aaKnown RBP10.3□□□□□ -0.76
TOP3A-215ENST00000583328 OR5F1O95221 314 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 GNB2P62879 340 aa10.3□□□□□ -0.76
TOP3A-215ENST00000583328 MRPS34P82930 218 aaKnown RBP10.3□□□□□ -0.76
TOP3A-215ENST00000583328 PSG4Q00888 419 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms