RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
CDK5RAP3-223ENST00000582114 COA3Q9Y2R0 106 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-223ENST00000582114 PCDHGB1Q9Y5G3 927 aa9.8□□□□□ -0.84
CDK5RAP3-223ENST00000582114 IGHV3OR16-10A0A075B7F0 116 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 PRSS37A4D1T9 235 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 NME4O00746 187 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SOCS2O14508 198 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SLC16A7O60669 478 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 NCK1P16333 377 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 CENPAP49450 140 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SLC7A2P52569 658 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 BTG1P62324 171 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 DBPQ10586 325 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ZNF154Q13106 437 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 KRR1Q13601 381 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 RRM2BQ7LG56 351 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 FAM122BQ7Z309 247 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 JAZF1Q86VZ6 243 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SLC15A3Q8IY34 581 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 KLHL36Q8N4N3 616 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SPICQ8N5J4 248 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ZNF283Q8N7M2 679 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ATG16L2Q8NAA4 619 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 OR10AD1Q8NGE0 317 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ZNF420Q8TAQ5 688 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 TAF15Q92804 592 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ZMYND19Q96E35 227 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SAMD8Q96LT4 415 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SIGLEC11Q96RL6 698 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SYT4Q9H2B2 425 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 PATZ1Q9HBE1 687 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 ASH2LQ9UBL3 628 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 POLR1DQ9Y2S0 133 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 AUP1Q9Y679 476 aa9.79□□□□□ -0.84
CDK5RAP3-223ENST00000582114 HTR3EA5X5Y0 456 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 DNAJC9-AS1A6NH13 148 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 H0YL77 283 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 RER1O15258 196 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 COX5BP10606 129 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 H2AFXP16104 143 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 TNFRSF1AP19438 455 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 KITLGP21583 273 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SLC6A9P48067 706 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 MMP16P51512 607 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 PRSS12P56730 875 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 GUCY1A3Q02108 690 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 AQP6Q13520 282 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 MEP1BQ16820 701 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 CCDC92Q53HC0 331 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 FGD3Q5JSP0 725 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 KLF17Q5JT82 389 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 OR2T2Q6IF00 324 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 RBMS3Q6XE24 437 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 PTCHD4Q6ZW05 846 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 CBLL1Q75N03 491 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 TSEN54Q7Z6J9 526 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 LRRC28Q86X40 367 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 OR1F12Q8NHA8 337 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SGMS2Q8NHU3 365 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SLC7A13Q8TCU3 470 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 FAM162AQ96A26 154 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 HAVCR1Q96D42 359 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 TSSK2Q96PF2 358 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 WDR76Q9H967 626 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 NMNAT1Q9HAN9 279 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 NTN4Q9HB63 628 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 MRGBPQ9NV56 204 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 NUP50Q9UKX7 468 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 IER3IP1Q9Y5U9 82 aa9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 SOX21Q9Y651 276 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-223ENST00000582114 OR6C6A6NF89 314 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 KHDRBS3O75525 346 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 DIRAS1O95057 198 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CYB5R3P00387 301 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 COX4I1P13073 169 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ZNF12P17014 697 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SDHAP31040 664 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 GSK3BP49841 420 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ANKDD1AQ495B1 522 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ESCO2Q56NI9 601 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CORO6Q6QEF8 472 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TMPRSS11FQ6ZWK6 438 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ARPINQ7Z6K5 226 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CYP4Z1Q86W10 505 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 GLB1L2Q8IW92 636 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 BHLHE23Q8NDY6 225 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PTP4A1Q93096 173 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 POP5Q969H6 163 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 C1orf147Q96MC9 270 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ZNF48Q96MX3 618 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 MRI1Q9BV20 369 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 NDEL1Q9GZM8 345 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 NUAK2Q9H093 628 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 GCM1Q9NP62 436 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OR5V1Q9UGF6 321 aa9.77□□□□□ -0.85
CDK5RAP3-223ENST00000582114 IL19Q9UHD0 177 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms