RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FAM71E1Q6IPT2 247 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 TMEM53Q6P2H8 277 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 RIMKLAQ8IXN7 391 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 OFCC1Q8IZS5 231 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 OR9G4Q8NGQ1 327 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 OR2L8Q8NGY9 312 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 UBALD1Q8TB05 177 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 LRRC29Q8WV35 223 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 TSEN15Q8WW01 171 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 NTAN1Q96AB6 310 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 COL21A1Q96P44 957 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 XPO6Q96QU8 1125 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 ACTR3CQ9C0K3 210 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 SAV1Q9H4B6 383 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 UBE2ZQ9H832 354 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 EDA2RQ9HAV5 297 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 CCNB1IP1Q9NPC3 277 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 ZDHHC4Q9NPG8 344 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 CYTL1Q9NRR1 136 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 C20orf96Q9NUD7 363 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 SLC9A3R1O14745 358 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 ANXA8P13928 327 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 TCN2P20062 427 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 GSTM3P21266 225 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 STOMP27105 288 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 ATP5OP48047 213 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 QPRTQ15274 297 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 XKR4Q5GH76 650 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 ANXA8L1Q5VT79 327 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 UBE2UQ5VVX9 321 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 NANOGP8Q6NSW7 305 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 PRMT9Q6P2P2 845 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 MRPL55Q7Z7F7 128 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 PQLC3Q8N755 202 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 OR10AD1Q8NGE0 317 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 OR52K2Q8NGK3 314 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 OR5K2Q8NHB8 316 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 SYNPRQ8TBG9 265 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 APH1BQ8WW43 257 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 TMEM230Q96A57 120 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 MRGPRFQ96AM1 343 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 RBMXL1Q96E39 390 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 SEH1LQ96EE3 360 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 GALNT14Q96FL9 552 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 TEKT3Q9BXF9 490 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF430Q9H8G1 570 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 HMG20AQ9NP66 347 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 YTHDF2Q9Y5A9 579 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 UBN2Q6ZU65 1347 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 IGSF9BQ9UPX0 1349 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 PCM1Q15154 2024 aa2.81□□□□□ -1.96
SMCHD1-205ENST00000581383 IGKV2-28A0A075B6P5 120 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 KBTBD11-OT1A0A1B0GTJ5 212 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 K7EMT4 169 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CACNG3O60359 315 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 LSM8O95777 96 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CD160O95971 181 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 IGKV2D-28P01615 120 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 FGF4P08620 206 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 MRPL3P09001 348 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CD3GP09693 182 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 RHOXF2BP0C7M4 288 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 OR8G3PP0DMU2 310 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CT45A6P0DMU7 189 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CT45A5P0DMU8 189 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CT45A7P0DMV0 189 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 U2AF2P26368 475 aaKnown RBP eCLIP2.8□□□□□ -1.969e-7■■□□□ 14.5
SMCHD1-205ENST00000581383 HCAR3P49019 387 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 RAB9AP51151 201 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 IL18Q14116 193 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 PGGHGQ32M88 737 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 ORMDL2Q53FV1 153 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CT45A1Q5HYN5 189 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 FAM78AQ5JUQ0 283 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 C1orf185Q5T7R7 199 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CLEC2AQ6UVW9 174 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 NPSR1Q6W5P4 371 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 SSX9Q7RTT3 188 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 BPIFCQ8NFQ6 507 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 OR52E2Q8NGJ4 325 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CT45A3Q8NHU0 189 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 MTG1Q9BT17 334 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 UCK2Q9BZX2 261 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 ZYG11BQ9C0D3 744 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 SLC7A5P2Q9GIP4 190 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 WFDC1Q9HC57 220 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF355PQ9NSJ1 428 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNRD1Q9P1U0 126 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CLN8Q9UBY8 286 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 CABIN1Q9Y6J0 2220 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 DOCK9Q9BZ29 2069 aa2.8□□□□□ -1.96
SMCHD1-205ENST00000581383 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 OR6C74A6NCV1 312 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 CASQ2O14958 399 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 B4GALT5O43286 388 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 RAD51CO43502 376 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 CTAG2O75638 210 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 FGFR1OPO95684 399 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms