RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PLEK2Q9NYT0 353 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 GDF2Q9UK05 429 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 BLOC1S6Q9UL45 172 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 IQCMA0A1B0GVH7 501 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 EFCAB10A6NFE3 127 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 TVP23AA6NH52 213 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF878C9JN71 531 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 PRSS44E7EML9 344 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 C19orf84I3L1E1 186 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 SLC1A7O00341 560 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 SYNGR3O43761 229 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 SELENOFO60613 162 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF254O75437 659 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 LYNP07948 512 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 SPARCP09486 303 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 CAPZA2P47755 286 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 EGR3Q06889 387 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 KRTAP27-1Q3LI81 207 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 RNLSQ5VYX0 342 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 KCTD18Q6PI47 426 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-203ENST00000580986 CFAP77Q6ZQR2 320 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 C22orf34Q6ZV56 151 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-203ENST00000580986 DCXRQ7Z4W1 244 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF584Q8IVC4 421 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 OR51G2Q8NGK0 314 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 OR1J2Q8NGS2 313 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 FGFBP3Q8TAT2 258 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 HAVCR2Q8TDQ0 301 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 LGALS12Q96DT0 336 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 MRPL48Q96GC5 212 aaKnown RBP9.04□□□□□ -0.96
CCDC47-203ENST00000580986 MAP6Q96JE9 813 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 RADILQ96JH8 1075 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 CNBD2Q96M20 576 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 FOXN4Q96NZ1 517 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ATF6BQ99941 703 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ABHD6Q9BV23 337 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 WNT5BQ9H1J7 359 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 ESRP2Q9H6T0 727 aaKnown RBP9.04□□□□□ -0.96
CCDC47-203ENST00000580986 NIPAL2Q9H841 368 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 RNF121Q9H920 327 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 NOX3Q9HBY0 568 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 SCN3BQ9NY72 215 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 NPAP1Q9NZP6 1156 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 PSORS1C1Q9UIG5 152 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 LAMP5Q9UJQ1 280 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
CCDC47-203ENST00000580986 IGHV1-18A0A0C4DH31 117 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 FAM221AA4D161 298 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF670-ZNF695F2Z2N8 137 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 CASKO14936 926 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 RER1O15258 196 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 DOK2O60496 412 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SULT1C4O75897 302 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 APOC1P02654 83 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 CECR9P0C854 216 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 PSKH1P11801 424 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 TUBG1P23258 451 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 CRHBPP24387 322 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 PCSK6P29122 969 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 ATP6V1E1P36543 226 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 OPRL1P41146 370 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 ACTA2P62736 377 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 GRB2P62993 217 aaKnown RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 ACTG2P63267 376 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SLC35A2P78381 396 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 DBPQ10586 325 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SMN1Q16637 294 aaKnown RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 CCDC92Q53HC0 331 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 NCMAPQ5T1S8 102 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 UNQ6126/PRO20091Q6UXV3 157 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 B3GLCTQ6Y288 498 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 MEX3BQ6ZN04 569 aaKnown RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 KCTD20Q7Z5Y7 419 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SLC35F2Q8IXU6 374 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF679Q8IYX0 411 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 OR10S1Q8NGN2 331 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 OR1F12Q8NHA8 337 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 HTRA1Q92743 480 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SLAMF6Q96DU3 332 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 POM121L2Q96KW2 1035 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 SIGLEC11Q96RL6 698 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 DUSP21Q9H596 190 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 TUBG2Q9NRH3 451 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 CRIM1Q9NZV1 1036 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 DIMT1Q9UNQ2 313 aaKnown RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 TPRKBQ9Y3C4 175 aa9.03□□□□□ -0.96
CCDC47-203ENST00000580986 USP9YO00507 2555 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-203ENST00000580986 TRIM64A6NGJ6 449 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 DEFB108AA8MXU0 73 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 CRYAAP02489 173 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 MRPL3P09001 348 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 PATE4P0C8F1 98 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF35P13682 527 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms