RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 MTX3Q5HYI7 312 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 DNM1P34Q6PK57 102 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 ARL9Q6T311 187 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 USP51Q70EK9 711 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 OR6V1Q8N148 313 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 ARHGAP24Q8N264 748 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 OR4C15Q8NGM1 316 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 CLDND2Q8NHS1 167 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 HPS1Q92902 700 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 SAP30LQ9HAJ7 183 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 SRA1Q9HD15 236 aaKnown RBP13.21□□□□□ -0.29
PMP22-208ENST00000580584 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.29
PMP22-208ENST00000580584 DECR2Q9NUI1 292 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 LPAR3Q9UBY5 353 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 GRIP1Q9Y3R0 1128 aa13.21□□□□□ -0.29
PMP22-208ENST00000580584 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
PMP22-208ENST00000580584 H3BSA7 217 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 KRT36O76013 467 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 CCNB2O95067 398 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 RENP00797 406 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 HMGA2P52926 109 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 CDH15P55291 814 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 PSG7Q13046 419 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
PMP22-208ENST00000580584 KCNMB1Q16558 191 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 AVPI1Q5T686 147 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 ZNF770Q6IQ21 691 aaPredicted RBP13.2□□□□□ -0.3
PMP22-208ENST00000580584 LINC01356Q8N9X3 169 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 OR52E2Q8NGJ4 325 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 PLA2G12AQ9BZM1 189 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 RACGAP1Q9H0H5 632 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 MUC13Q9H3R2 512 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 MAGIXQ9H6Y5 334 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 MSL2Q9HCI7 577 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 TREM2Q9NZC2 230 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
PMP22-208ENST00000580584 B9D1Q9UPM9 204 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 LHFPL6Q9Y693 200 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 U3KQV3 271 aa13.2□□□□□ -0.3
PMP22-208ENST00000580584 MXRA5Q9NR99 2828 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
PMP22-208ENST00000580584 GASTP01350 101 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 IFNA2P01563 188 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 GSTM3P21266 225 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 CRYBB2P43320 205 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 ERFP50548 548 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 TMEM33P57088 247 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 MVKQ03426 396 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.19□□□□□ -0.3
PMP22-208ENST00000580584 CR1LQ2VPA4 569 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 SPRNQ5BIV9 151 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 NPEPL1Q8NDH3 523 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 SLC26A10Q8NG04 563 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 OR52L1Q8NGH7 329 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 OR8D4Q8NGM9 314 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 TRIM15Q9C019 465 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 TBCCD1Q9NVR7 557 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 STARD10Q9Y365 291 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 ATRQ13535 2644 aa13.19□□□□□ -0.3
PMP22-208ENST00000580584 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 BHLHE40O14503 412 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 TFP02787 698 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 SRD5A1P18405 259 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 RBMXP38159 391 aaKnown RBP13.18□□□□□ -0.3
PMP22-208ENST00000580584 TEKQ02763 1124 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 FAM98BQ52LJ0 330 aaKnown RBP13.18□□□□□ -0.3
PMP22-208ENST00000580584 FAM209AQ5JX71 171 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 CFAP77Q6ZQR2 320 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 LINC00346Q8IVM7 164 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 C1orf159Q96HA4 380 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 CYSLTR2Q9NS75 346 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 FAM53CQ9NYF3 392 aa13.18□□□□□ -0.3
PMP22-208ENST00000580584 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
PMP22-208ENST00000580584 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
PMP22-208ENST00000580584 CLDN25C9JDP6 229 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 IDH3BO43837 385 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 SOX14O95416 240 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 HNF1AP20823 631 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 PYCR1P32322 319 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 HIST1H3AP68431 136 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 COX10Q12887 443 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 HLXQ14774 488 aaPredicted RBP13.17□□□□□ -0.3
PMP22-208ENST00000580584 HFEQ30201 348 aa13.17□□□□□ -0.3
PMP22-208ENST00000580584 HIST2H3PS2Q5TEC6 136 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms