RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 CCNIQ14094 377 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 TRIM25Q14258 630 aaKnown RBP17.19■□□□□ 0.34
SMG8-204ENST00000580498 RFPL4BQ6ZWI9 263 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 VASH1Q7L8A9 365 aaPredicted RBP17.19■□□□□ 0.34
SMG8-204ENST00000580498 GLCCI1Q86VQ1 547 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 OR2AJ1Q8NGZ0 328 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 OR1F12Q8NHA8 337 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 RAB1CQ92928 201 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 RAB39BQ96DA2 213 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 SAMD8Q96LT4 415 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 HDHD2Q9H0R4 259 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 REEP1Q9H902 201 aa17.19■□□□□ 0.34
SMG8-204ENST00000580498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMG8-204ENST00000580498 SURF4O15260 269 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 NCR1O76036 304 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 IGFBP5P24593 272 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 CDKN2AP42771 156 aaKnown RBP17.18■□□□□ 0.34
SMG8-204ENST00000580498 GSSP48637 474 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 SCGB2A2Q13296 93 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 KCNMB1Q16558 191 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 FAM120AOSQ5T036 256 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 LCN8Q6JVE9 175 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 ZNF620Q6ZNG0 422 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 PTCHD4Q6ZW05 846 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 USP51Q70EK9 711 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.18■□□□□ 0.34
SMG8-204ENST00000580498 TEX29Q8N6K0 151 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 OR4K13Q8NH42 304 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 NARFLQ9H6Q4 476 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 SRA1Q9HD15 236 aaKnown RBP17.18■□□□□ 0.34
SMG8-204ENST00000580498 CDH10Q9Y6N8 788 aa17.18■□□□□ 0.34
SMG8-204ENST00000580498 ZNF823P16415 610 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 TNFRSF1AP19438 455 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 SRP14P37108 136 aaKnown RBP17.17■□□□□ 0.34
SMG8-204ENST00000580498 DVL1P1P54792 670 aaPredicted RBP17.17■□□□□ 0.34
SMG8-204ENST00000580498 GK3PQ14409 553 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 TRIP10Q15642 601 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 MALRD1Q5VYJ5 2156 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 YIPF5Q969M3 257 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 NMNAT3Q96T66 252 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 RPRD1BQ9NQG5 326 aaKnown RBP17.17■□□□□ 0.34
SMG8-204ENST00000580498 TMEFF2Q9UIK5 374 aaPredicted RBP17.17■□□□□ 0.34
SMG8-204ENST00000580498 KCNG2Q9UJ96 466 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 B9D1Q9UPM9 204 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 LYVE1Q9Y5Y7 322 aa17.17■□□□□ 0.34
SMG8-204ENST00000580498 NGFP01138 241 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 IGHV1-46P01743 117 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 HIST1H1CP16403 213 aaKnown RBP17.16■□□□□ 0.34
SMG8-204ENST00000580498 ATP6V1B2P21281 511 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 MPV17P39210 176 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 HMGA2P52926 109 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 FXYD6P3P58550 94 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 ECH1Q13011 328 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 CR1LQ2VPA4 569 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 PGBD2Q6P3X8 592 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 OR51F2Q8NH61 342 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 CLDND2Q8NHS1 167 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 TMEM158Q8WZ71 300 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 PTP4A1Q93096 173 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 APOBEC3DQ96AK3 386 aaPredicted RBP17.16■□□□□ 0.34
SMG8-204ENST00000580498 ASB9Q96DX5 294 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 GPA33Q99795 319 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 COQ7Q99807 217 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 C1orf21Q9H246 121 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 TBC1D23Q9NUY8 699 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 BAIAP2Q9UQB8 552 aa17.16■□□□□ 0.34
SMG8-204ENST00000580498 SAMHD1Q9Y3Z3 626 aaKnown RBP17.16■□□□□ 0.34
SMG8-204ENST00000580498 MPZL1O95297 269 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 SCG5P05408 212 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 ADH4P08319 380 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 THBS2P35442 1172 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 MAGEA2P43356 314 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 MMP15P51511 669 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 TNFAIP6P98066 277 aaPredicted RBP17.15■□□□□ 0.34
SMG8-204ENST00000580498 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMG8-204ENST00000580498 CLEC12AQ5QGZ9 265 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 OR2T5Q6IEZ7 315 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 SDR9C7Q8NEX9 313 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 OR52E2Q8NGJ4 325 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 OR2T4Q8NH00 348 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 OR2T29Q8NH02 315 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 CCL17Q92583 94 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 CCDC124Q96CT7 223 aaKnown RBP17.15■□□□□ 0.34
SMG8-204ENST00000580498 PITX2Q99697 317 aa17.15■□□□□ 0.34
SMG8-204ENST00000580498 RNF212BA8MTL3 300 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 GNGT2O14610 69 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 RER1O15258 196 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 RP2O75695 350 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 IFNGP01579 166 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 RAP2AP10114 183 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 RAC2P15153 192 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 MVKQ03426 396 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 DNAL1Q4LDG9 190 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 SLC27A4Q6P1M0 643 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 SHQ1Q6PI26 577 aaKnown RBP17.14■□□□□ 0.33
SMG8-204ENST00000580498 RINLQ6ZS11 566 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 RASSF6Q6ZTQ3 369 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 AQP11Q8NBQ7 271 aa17.14■□□□□ 0.33
SMG8-204ENST00000580498 PROKR2Q8NFJ6 384 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms