RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 HDHD2Q9H0R4 259 aa13.83□□□□□ -0.2
CSNK1D-212ENST00000580061 FBXL3Q9UKT7 428 aa13.83□□□□□ -0.2
CSNK1D-212ENST00000580061 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
CSNK1D-212ENST00000580061 HEATR1Q9H583 2144 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 IGHV1-18A0A0C4DH31 117 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 A0A1W2PQL4 384 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 OR6C6A6NF89 314 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 PTGES3LE9PB15 166 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 PHYHO14832 338 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 SYNGR3O43761 229 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 DOK2O60496 412 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 SERPINA5P05154 406 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 CELA3BP08861 270 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 ADRA2AP08913 450 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 COX5BP10606 129 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 KIR2DL3P43628 341 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF83P51522 516 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 IDH3GP51553 393 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 SLC35A2P78381 396 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 MVKQ03426 396 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF85Q03923 595 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 PLP2Q04941 152 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 ST3GAL4Q11206 333 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 RHOUQ7L0Q8 258 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 SSX6Q7RTT6 188 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 MYPOPQ86VE0 399 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 ACBD7Q8N6N7 88 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 RNF133Q8WVZ7 376 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 TMEM80Q96HE8 168 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 COPS4Q9BT78 406 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 JAM3Q9BX67 310 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 DUSP21Q9H596 190 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 DDX28Q9NUL7 540 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 PAK1IP1Q9NWT1 392 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 CRIM1Q9NZV1 1036 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 COL12A1Q99715 3063 aa13.82□□□□□ -0.2
CSNK1D-212ENST00000580061 LRRK2Q5S007 2527 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 IQCMA0A1B0GVH7 501 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 DAPL1A0PJW8 107 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 A1L4Q6 167 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF878C9JN71 531 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 M0R1B8 84 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 PTHP01270 115 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 CRYGSP22914 178 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 APEX1P27695 318 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 DCKP27707 260 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 KCTD18Q6PI47 426 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF322Q6U7Q0 402 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 MEX3BQ6ZN04 569 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 OR1F12Q8NHA8 337 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 IPCEF1Q8WWN9 437 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ASB17Q8WXJ9 295 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 SGCDQ92629 289 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 OR8B4Q96RC9 309 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 COQ7Q99807 217 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ATF6BQ99941 703 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF649Q9BS31 505 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 YTHDF1Q9BYJ9 559 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 TTTY10Q9BZA0 68 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 NGBQ9NPG2 151 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 INPP5EQ9NRR6 644 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 ATPIF1Q9UII2 106 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 BLOC1S6Q9UL45 172 aa13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-212ENST00000580061 RTTNQ86VV8 2226 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 ANKHD1Q8IWZ3 2542 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 CDK1P06493 297 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 CECR9P0C854 216 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 EPXP11678 715 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 STOMP27105 288 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 HTR5AP47898 357 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 ROM1Q03395 351 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 EGR3Q06889 387 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 ECH1Q13011 328 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 DEGS2Q6QHC5 323 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 LRRN1Q6UXK5 716 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 SPATC1Q76KD6 591 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 SLC30A7Q8NEW0 376 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 FAM222BQ8WU58 562 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 MYDGFQ969H8 173 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 POM121L2Q96KW2 1035 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 SPOCK3Q9BQ16 436 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 ERVK13-1Q9NX77 482 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 SLCO1C1Q9NYB5 712 aa13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 GCN1Q92616 2671 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-212ENST00000580061 LOC100509620A0A075B734 347 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 DPRXA6NFQ7 191 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 PSMD9O00233 223 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 CASKO14936 926 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 LIMS3P0CW19 117 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 LIMS4P0CW20 117 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 C21orf33P30042 268 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 APLNRP35414 380 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 OPRL1P41146 370 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms