RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 TSC22D1Q15714 1073 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 TOMM34Q15785 309 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 PNLIPRP3Q17RR3 467 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 C2orf76Q3KRA6 126 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ACTBL2Q562R1 376 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PAN3Q58A45 887 aaKnown RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 PABPC1L2AQ5JQF8 200 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 WDR38Q5JTN6 314 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 TEX30Q5JUR7 227 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ARHGAP40Q5TG30 622 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 NKAIN2Q5VXU1 208 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 AWAT2Q6E213 333 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 TMEM225Q6GV28 225 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 FAM166AQ6J272 317 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 C11orf87Q6NUJ2 197 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 FAAP20Q6NZ36 180 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PAPD4Q6PIY7 484 aaKnown RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 DNM1P34Q6PK57 102 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 NPSR1Q6W5P4 371 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 CFAP77Q6ZQR2 320 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ACOT7LQ6ZUV0 252 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PRSS41Q7RTY9 318 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 MAMDC2Q7Z304 686 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 CACUL1Q86Y37 369 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ZNF584Q8IVC4 421 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 SFTPA1Q8IWL2 248 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ZNF679Q8IYX0 411 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 FAM169BQ8N8A8 192 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 INO80EQ8NBZ0 244 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR51D1Q8NGF3 324 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR5T3Q8NGG3 340 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR52H1Q8NGJ2 320 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR52B4Q8NGK2 314 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR1J4Q8NGS1 313 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR10K1Q8NGX5 313 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR6N2Q8NGY6 317 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OTOSQ8NHW6 89 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 STOML3Q8TAV4 291 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 THAP6Q8TBB0 222 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 RNF128Q8TEB7 428 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PCNPQ8WW12 178 aaKnown RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR1E3Q8WZA6 343 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 GCDHQ92947 438 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 ELSPBP1Q96BH3 223 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 TRIM43Q96BQ3 446 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 MRPS24Q96EL2 167 aaKnown RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 TSPAN32Q96QS1 320 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 CDCA3Q99618 268 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 EDEM2Q9BV94 578 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 NKX6-2Q9C056 277 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 LAT2Q9GZY6 243 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 OR10A5Q9H207 317 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 S1PR5Q9H228 398 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 CDCP1Q9H5V8 836 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 GAREM1Q9H706 876 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 SEC61A2Q9H9S3 476 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 CAPN10Q9HC96 672 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PRTFDC1Q9NRG1 225 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 COQ3Q9NZJ6 369 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 CPNE7Q9UBL6 633 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 PURGQ9UJV8 347 aaKnown RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 TNFSF18Q9UNG2 199 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 KCNK7Q9Y2U2 307 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 ZNF175Q9Y473 711 aa4.76□□□□□ -1.65
CDH8-206ENST00000580044 KLF2Q9Y5W3 355 aaPredicted RBP4.76□□□□□ -1.65
CDH8-206ENST00000580044 TRAV8-7A0A075B6U6 113 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 TRAV14DV4A0A0A6YYC5 116 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 TMEM272A0A1B0GTI8 110 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 LOC390937A0A1W2PQ73 354 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 LINC01553A4QN01 128 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 RNF222A6NCQ9 220 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 FRG2CA6NGY1 282 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 A6NIZ1 184 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 A8MUA0 341 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 PRR32B1ATL7 298 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 H7C2Y5 167 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 FOXS1O43638 330 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 EIF4E2O60573 245 aaKnown RBP4.75□□□□□ -1.65
CDH8-206ENST00000580044 RAD1O60671 282 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 SLC25A12O75746 678 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 KDM4BO94953 1096 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 OR6A2O95222 327 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 NSA2O95478 260 aaKnown RBP4.75□□□□□ -1.65
CDH8-206ENST00000580044 EML2O95834 649 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 TNFP01375 233 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 IGKV1D-16P01601 117 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 HLA-AP01891 365 aaKnown RBP4.75□□□□□ -1.65
CDH8-206ENST00000580044 APOC3P02656 99 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 CD3DP04234 171 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 AMY2AP04746 511 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 ISG15P05161 165 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 GP1BAP07359 652 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 ERCC1P07992 297 aaPredicted RBP4.75□□□□□ -1.65
CDH8-206ENST00000580044 ITGA5P08648 1049 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 PET100P0DJ07 73 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 CT45A8P0DMV1 189 aa4.75□□□□□ -1.65
CDH8-206ENST00000580044 CT45A9P0DMV2 189 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms