RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 LHFPL6Q9Y693 200 aa20.52■□□□□ 0.88
LIMD2-207ENST00000579329 RER1O15258 196 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 ABHD16AO95870 558 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 CLPTM1O96005 669 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 TFP02787 698 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 GCH1P30793 250 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 GRK5P34947 590 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 PPP1CBP62140 327 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 HIST1H3AP68431 136 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 CRMP1Q14194 572 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 MOGQ16653 247 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 NKPD1Q17RQ9 610 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 ZNF718Q3SXZ3 478 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 HIST2H3PS2Q5TEC6 136 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 SHQ1Q6PI26 577 aaKnown RBP20.51■□□□□ 0.87
LIMD2-207ENST00000579329 HIST2H3AQ71DI3 136 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 ASRGL1Q7L266 308 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 OR1F12Q8NHA8 337 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 SLC25A40Q8TBP6 338 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 NRBF2Q96F24 287 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 HDHD2Q9H0R4 259 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 KCNG2Q9UJ96 466 aa20.51■□□□□ 0.87
LIMD2-207ENST00000579329 OR6C6A6NF89 314 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 RIIAD1A6NNX1 92 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 H3BSA7 217 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 NDUFS8O00217 210 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 LY6G6DO95868 133 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 HEXAP06865 529 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 PRKACGP22612 351 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 PYCR1P32322 319 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 CCNIQ14094 377 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 SPATA46Q5T0L3 261 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 ATG16L2Q8NAA4 619 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 OR9Q1Q8NGQ5 310 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 SNX33Q8WV41 574 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 DNAJC9Q8WXX5 260 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 UTP4Q969X6 686 aaKnown RBP20.5■□□□□ 0.87
LIMD2-207ENST00000579329 MARS2Q96GW9 593 aaKnown RBP20.5■□□□□ 0.87
LIMD2-207ENST00000579329 RBM4Q9BWF3 364 aaKnown RBP20.5■□□□□ 0.87
LIMD2-207ENST00000579329 CDADC1Q9BWV3 514 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 NTN4Q9HB63 628 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 CMC2Q9NRP2 79 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 TBCCD1Q9NVR7 557 aa20.5■□□□□ 0.87
LIMD2-207ENST00000579329 NGFP01138 241 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 IGHV3-13P01766 116 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 OSMP13725 252 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 ZNF823P16415 610 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 ZNF3P17036 446 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 POU1F1P28069 291 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 SLC25A1P53007 311 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 ATP6AP1Q15904 470 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 CARTPTQ16568 116 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 ELFN2Q5R3F8 820 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 SLC27A4Q6P1M0 643 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 CORO6Q6QEF8 472 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 IQCF1Q8N6M8 205 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 MAPK1IP1LQ8NDC0 245 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 OR2AJ1Q8NGZ0 328 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 DUS3LQ96G46 650 aaKnown RBP20.49■□□□□ 0.87
LIMD2-207ENST00000579329 DCLRE1CQ96SD1 692 aaKnown RBP20.49■□□□□ 0.87
LIMD2-207ENST00000579329 COQ7Q99807 217 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 PIMREGQ9BSJ6 248 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 OR2J1Q9GZK6 312 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 MRPL22Q9NWU5 206 aaKnown RBP20.49■□□□□ 0.87
LIMD2-207ENST00000579329 AP4S1Q9Y587 144 aa20.49■□□□□ 0.87
LIMD2-207ENST00000579329 LOC390937A0A1W2PQ73 354 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 DAOP14920 347 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 MBNL2Q5VZF2 373 aaKnown RBP20.48■□□□□ 0.87
LIMD2-207ENST00000579329 SLC18B1Q6NT16 456 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 LINC00346Q8IVM7 164 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 OR5K1Q8NHB7 308 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 KLF14Q8TD94 323 aaPredicted RBP20.48■□□□□ 0.87
LIMD2-207ENST00000579329 NMNAT2Q9BZQ4 307 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 HINT3Q9NQE9 182 aaKnown RBP20.48■□□□□ 0.87
LIMD2-207ENST00000579329 KIF17Q9P2E2 1029 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 GRIP1Q9Y3R0 1128 aa20.48■□□□□ 0.87
LIMD2-207ENST00000579329 RTTNQ86VV8 2226 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 A0A096LNT2 108 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 MT-ND5P03915 603 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 NAT2P11245 290 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 FCGR1AP12314 374 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 SPI1P17947 270 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 TUBG1P23258 451 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 FASP25445 335 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 GGT2P36268 569 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 MPV17P39210 176 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 ALKBH6Q3KRA9 238 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 OR51L1Q8NGJ5 315 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 UBASH3BQ8TF42 649 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 IPCEF1Q8WWN9 437 aaPredicted RBP20.47■□□□□ 0.87
LIMD2-207ENST00000579329 SLC7A6Q92536 515 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 COG8Q96MW5 612 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 TUBG2Q9NRH3 451 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 CYB5R1Q9UHQ9 305 aa20.47■□□□□ 0.87
LIMD2-207ENST00000579329 C17orf100A8MU93 164 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 VWC2LB2RUY7 222 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 J3QW42 95 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 EBAG9O00559 213 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 RGS6P49758 472 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 LOXL1Q08397 574 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms