RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 DCLRE1CQ96SD1 692 aaKnown RBP12.68□□□□□ -0.38
SS18-212ENST00000579061 OR2J1Q9GZK6 312 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 EGLN3Q9H6Z9 239 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 SRA1Q9HD15 236 aaKnown RBP12.68□□□□□ -0.38
SS18-212ENST00000579061 RPRD1BQ9NQG5 326 aaKnown RBP12.68□□□□□ -0.38
SS18-212ENST00000579061 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 ASH2LQ9UBL3 628 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 POLR1DQ9Y2S0 133 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 OR6C68A6NDL8 312 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 BHLHE40O14503 412 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 LILRA1O75019 489 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 NCR1O76036 304 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 NGFP01138 241 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 COL8A2P25067 703 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 CENPAP49450 140 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 TMEM33P57088 247 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 TEKQ02763 1124 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.67□□□□□ -0.38
SS18-212ENST00000579061 COX10Q12887 443 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 CCDC92Q53HC0 331 aaPredicted RBP12.67□□□□□ -0.38
SS18-212ENST00000579061 FAM209AQ5JX71 171 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 CD300LDQ6UXZ3 194 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 HIPK1Q86Z02 1210 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 AQP11Q8NBQ7 271 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 SLC26A10Q8NG04 563 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 OR52E2Q8NGJ4 325 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 OR1F12Q8NHA8 337 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 SLC7A6OSQ96CW6 309 aaPredicted RBP12.67□□□□□ -0.38
SS18-212ENST00000579061 DDOQ99489 341 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 CHID1Q9BWS9 393 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 HDHD2Q9H0R4 259 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 VNN3Q9NY84 501 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 BAIAP2Q9UQB8 552 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 LHFPL6Q9Y693 200 aa12.67□□□□□ -0.38
SS18-212ENST00000579061 PLSCR5A0PG75 271 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 DHRS12A0PJE2 317 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 ARRDC5A6NEK1 342 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 LYNX1G3V0Z9 82 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 CST1P01037 141 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 ADH4P08319 380 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 LYNX1P0DP58 116 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 MPV17P39210 176 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 MAGEB1P43366 347 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 RGS6P49758 472 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 MMP15P51511 669 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
SS18-212ENST00000579061 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 CLEC12AQ5QGZ9 265 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 SPATA46Q5T0L3 261 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 LNX2Q8N448 690 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 SDR9C7Q8NEX9 313 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 CANT1Q8WVQ1 401 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 YIPF5Q969M3 257 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 COQ7Q99807 217 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 KCNG2Q9UJ96 466 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 KLHL21Q9UJP4 597 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 U3KQV3 271 aa12.66□□□□□ -0.38
SS18-212ENST00000579061 RER1O15258 196 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 RP2O75695 350 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 DNAJC8O75937 253 aaPredicted RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 GPANK1O95872 356 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 TFP02787 698 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 ZNF16P17020 682 aaPredicted RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 KITLGP21583 273 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 CRYBB2P43320 205 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 ZNF81P51508 661 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 CCL8P80075 99 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 MEP1BQ16820 701 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 ZNF362Q5T0B9 420 aaPredicted RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 SLC35F1Q5T1Q4 408 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 FAM166AQ6J272 317 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 OR10G2Q8NGC3 310 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 OR8D4Q8NGM9 314 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 MSI2Q96DH6 328 aaKnown RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 TSSK6Q9BXA6 273 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 YY1AP1Q9H869 796 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
SS18-212ENST00000579061 DECR2Q9NUI1 292 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 TBC1D23Q9NUY8 699 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 ZDHHC8Q9ULC8 765 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
SS18-212ENST00000579061 LMX1BO60663 402 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 BNIP1Q12981 228 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 ECH1Q13011 328 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 PSG7Q13046 419 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 FLOT2Q14254 428 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 TMEM255AQ5JRV8 349 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 SLC18B1Q6NT16 456 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 PRIMA1Q86XR5 153 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 OR2T33Q8NG76 320 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 OR5L1Q8NGL2 311 aa12.64□□□□□ -0.39
SS18-212ENST00000579061 OR2AJ1Q8NGZ0 328 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms