RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ERFP50548 548 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RPS6KA3P51812 740 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PSME3P61289 254 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GLYATQ6IB77 296 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C8orf82Q6P1X6 216 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FAM122BQ7Z309 247 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C1QL2Q7Z5L3 287 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GLB1L2Q8IW92 636 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RNF148Q8N7C7 305 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ATG16L2Q8NAA4 619 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NANPQ8TBE9 248 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GCDHQ92947 438 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CMBLQ96DG6 245 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RSRC1Q96IZ7 334 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SLC6A7Q99884 636 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 WACQ9BTA9 647 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SUCNR1Q9BXA5 334 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NUAK2Q9H093 628 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FAM107BQ9H098 131 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ANKRD19PQ9H560 264 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TMEM106BQ9NUM4 274 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TBCCD1Q9NVR7 557 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PTTG3PQ9NZH4 202 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KLHL21Q9UJP4 597 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SAMD4AQ9UPU9 718 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SIGLEC7Q9Y286 467 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 STARD10Q9Y365 291 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 IER3IP1Q9Y5U9 82 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 A0A1W2PRQ8 180 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 UNC119BA6NIH7 251 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RER1O15258 196 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 AHCYL1O43865 530 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ICMTO60725 284 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FOXH1O75593 365 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PPP1R3DO95685 299 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CD55P08174 381 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ADH4P08319 380 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DBHP09172 617 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RHCEP18577 417 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GATA3P23771 443 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CFPP27918 469 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OMPP47874 163 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 HILS1P60008 231 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SPIBQ01892 262 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CDK5R2Q13319 367 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DGCR6Q14129 220 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 HLXQ14774 488 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SEC23BQ15437 767 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 MEP1BQ16820 701 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GPR139Q6DWJ6 353 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 LEG1Q6P5S2 330 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DNM1P34Q6PK57 102 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 HACD2Q6Y1H2 254 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 Q6ZR03 302 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PTCHD4Q6ZW05 846 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TSEN54Q7Z6J9 526 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 JAZF1Q86VZ6 243 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SPICQ8N5J4 248 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FAM86B1Q8N7N1 296 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FAM156AQ8NDB6 213 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR10AD1Q8NGE0 317 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR1F12Q8NHA8 337 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FANK1Q8TC84 345 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ZFAND2BQ8WV99 257 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ITLN1Q8WWA0 313 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CMTM5Q96DZ9 223 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SAMD8Q96LT4 415 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 COG8Q96MW5 612 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ERMAPQ96PL5 475 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ELAC2Q9BQ52 826 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SPAG4Q9NPE6 437 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NRIP3Q9NQ35 241 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NDUFAF4Q9P032 175 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 IL19Q9UHD0 177 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PPP1R3CQ9UQK1 317 aa7.78□□□□□ -1.16
CDK5RAP3-211ENST00000578996 IGHV3-64DA0A0J9YX35 117 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SURF4O15260 269 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PTP4A3O75365 173 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF205O95201 554 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GADD45GO95257 159 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 IGHV2-70P01814 119 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 HLA-DQA2P01906 255 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 KITLGP21583 273 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TUBG1P23258 451 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZFP36P26651 326 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NOS3P29474 1203 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CRABP1P29762 137 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CDKN2AP42771 156 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 LIMS1P48059 325 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SEC61A1P61619 476 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 LSM6P62312 80 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 BTG1P62324 171 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DBPQ10586 325 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CCDC92Q53HC0 331 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ARMCX4Q5H9R4 360 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms