RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 UPB1Q9UBR1 384 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 KCNN3Q9UGI6 736 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 B9D1Q9UPM9 204 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 BAIAP2Q9UQB8 552 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 KLHDC2Q9Y2U9 406 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FKBP7Q9Y680 259 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 LHFPL6Q9Y693 200 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 COMMD3-BMI1R4GMX3 469 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FLNAP21333 2647 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZANQ9Y493 2812 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 MED13LQ71F56 2210 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CCDC168Q8NDH2 2452 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 LOC100509620A0A075B734 347 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 C5orf63A6NC05 138 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR6C6A6NF89 314 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 TUBAL3A6NHL2 446 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 A6NNC1 897 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF726A6NNF4 738 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 J3QRE1 110 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 GNGT2O14610 69 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SYNGR3O43761 229 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RRP9O43818 475 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC16A7O60669 478 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SRSF10O75494 262 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 WBP4O75554 376 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR6A2O95222 327 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 GOSR1O95249 250 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ATP6V1G2O95670 118 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 HLA-HP01893 362 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 GYPBP06028 91 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CST2P09228 141 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 GNAO1P09471 354 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CECR9P0C854 216 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PATE4P0C8F1 98 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF35P13682 527 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CBR1P16152 277 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PPP3CBP16298 524 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF32P17041 273 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 LAP3P28838 519 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PYCR1P32322 319 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RPL4P36578 427 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RPS27P42677 84 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 KIR2DL3P43628 341 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC15A1P46059 708 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PTDSS1P48651 473 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CLRN1P58418 232 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PSG4Q00888 419 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC34A1Q06495 639 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 BSPH1Q075Z2 132 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CD47Q08722 323 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 KEAP1Q14145 624 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 MEP1BQ16820 701 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CCDC92Q53HC0 331 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 TEX30Q5JUR7 227 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC25A30Q5SVS4 291 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF684Q5T5D7 378 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR7E24Q6IFN5 339 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 C11orf71Q6IPW1 123 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC18B1Q6NT16 456 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ADAM5Q6NVV9 412 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC27A4Q6P1M0 643 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF813Q6ZN06 617 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CFAP77Q6ZQR2 320 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RRM2BQ7LG56 351 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PRSS45Q7RTY3 260 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 HDDC2Q7Z4H3 204 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 MDP1Q86V88 176 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ENTHD1Q8IYW4 607 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 PACRGLQ8N7B6 248 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ATG16L2Q8NAA4 619 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CPEB3Q8NE35 698 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR9Q1Q8NGQ5 310 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR6N1Q8NGY5 312 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OR52N5Q8NH56 324 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 TEX47Q8TBZ9 253 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 TMEM163Q8TC26 289 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 FNDC8Q8TC99 324 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ST7LQ8TDW4 575 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 C11orf40Q8WZ69 217 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 HSD17B8Q92506 261 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 NEUROG1Q92886 237 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 POM121L2Q96KW2 1035 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 DMRTB1Q96MA1 342 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 WWC2-AS2Q96NR7 200 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RDH12Q96NR8 316 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 FOXN4Q96NZ1 517 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SIGLEC11Q96RL6 698 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SH3GL3Q99963 347 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RBM4BQ9BQ04 359 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 C9orf16Q9BUW7 83 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF416Q9BWM5 594 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 HDHD5Q9BXW7 423 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 WNT5BQ9H1J7 359 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 TOR3AQ9H497 397 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 WDR76Q9H967 626 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 SIAEQ9HAT2 523 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 EMC7Q9NPA0 242 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 OBP2BQ9NPH6 170 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms