RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
IFT20-208ENST00000578985 CBLN4Q9NTU7 201 aa13.28□□□□□ -0.28
IFT20-208ENST00000578985 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
IFT20-208ENST00000578985 EIF3KQ9UBQ5 218 aaKnown RBP13.28□□□□□ -0.28
IFT20-208ENST00000578985 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
IFT20-208ENST00000578985 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
IFT20-208ENST00000578985 GPRIN2O60269 458 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 SPARCP09486 303 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 PSKH1P11801 424 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 SLC2A5P22732 501 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 SERPINF1P36955 418 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 WNT5AP41221 380 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 RPS27P42677 84 aaKnown RBP13.27□□□□□ -0.29
IFT20-208ENST00000578985 RAD52P43351 418 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 UCP2P55851 309 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 EFNB1P98172 346 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 APOFQ13790 326 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 PCK2Q16822 640 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 ERI1Q8IV48 349 aaKnown RBP13.27□□□□□ -0.29
IFT20-208ENST00000578985 TMEM163Q8TC26 289 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 IL4I1Q96RQ9 567 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 MBOAT4Q96T53 435 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 PITX2Q99697 317 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 COQ7Q99807 217 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 OR51B6Q9H340 312 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 TOR3AQ9H497 397 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 CXorf56Q9H5V9 222 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 DCLRE1BQ9H816 532 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 MARCH7Q9H992 704 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 H2AFY2Q9P0M6 372 aaPredicted RBP13.27□□□□□ -0.29
IFT20-208ENST00000578985 ATPIF1Q9UII2 106 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 ITGB1BP2Q9UKP3 347 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 CMAHPQ9Y471 501 aa13.27□□□□□ -0.29
IFT20-208ENST00000578985 E9PQ18 207 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 SMPD2O60906 423 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 CDC42P60953 191 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 LRRC36Q1X8D7 754 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 MST1LQ2TV78 715 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 LCN1P1Q5VSP4 162 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 LPCAT4Q643R3 524 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 C11orf71Q6IPW1 123 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 ARL9Q6T311 187 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 ZNF771Q7L3S4 317 aaPredicted RBP13.26□□□□□ -0.29
IFT20-208ENST00000578985 BCDIN3DQ7Z5W3 292 aaKnown RBP13.26□□□□□ -0.29
IFT20-208ENST00000578985 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 GALNT4Q8N4A0 578 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 OR6N2Q8NGY6 317 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 SLC7A6Q92536 515 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 HRASLS5Q96KN8 279 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 BCL2L14Q9BZR8 327 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 ELOVL3Q9HB03 270 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 C8orf4Q9NR00 106 aa13.26□□□□□ -0.29
IFT20-208ENST00000578985 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 CCDC182A6NF36 153 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 B9A039 149 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 OVOL3O00110 214 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 ABHD16AO95870 558 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 LCKP06239 509 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 DBHP09172 617 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 PEX2P28328 305 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 ART1P52961 327 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 ECH1Q13011 328 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 EFNB3Q15768 340 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 RGS7BPQ6MZT1 257 aaPredicted RBP13.25□□□□□ -0.29
IFT20-208ENST00000578985 UNQ6126/PRO20091Q6UXV3 157 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 MEPCEQ7L2J0 689 aaKnown RBP13.25□□□□□ -0.29
IFT20-208ENST00000578985 SHFQ7M4L6 423 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 DCXRQ7Z4W1 244 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 OR1J1Q8NGS3 322 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 FAM81AQ8TBF8 368 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 C4orf45Q96LM5 186 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 DCLRE1CQ96SD1 692 aaKnown RBP13.25□□□□□ -0.29
IFT20-208ENST00000578985 TEAD3Q99594 435 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 FOXC2Q99958 501 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
IFT20-208ENST00000578985 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 GRIP1Q9Y3R0 1128 aa13.25□□□□□ -0.29
IFT20-208ENST00000578985 CCDC168Q8NDH2 2452 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 H0YHG0 523 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 SELENOFO60613 162 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 ICMTO60725 284 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 CDKN1AP38936 164 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 PPP1CBP62140 327 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 SWI5Q1ZZU3 235 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 RSPO1Q2MKA7 263 aaPredicted RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 GID4Q8IVV7 300 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 PACRGLQ8N7B6 248 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 OR10S1Q8NGN2 331 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 ABHD4Q8TB40 342 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms