RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HAS2Q92819 552 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 RBM24Q9BX46 236 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 PRRG4Q9BZD6 226 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 PBOV1Q9GZY1 135 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SLC25A18Q9H1K4 315 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 LIN7BQ9HAP6 207 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 COPZ2Q9P299 210 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 MALT1Q9UDY8 824 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 IL17BQ9UHF5 180 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 NUFIP1Q9UHK0 495 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 TBC1D24Q9ULP9 559 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SLC22A13Q9Y226 551 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 PCDHGA9Q9Y5G4 932 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 MRPS18BQ9Y676 258 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 KMT2EQ8IZD2 1858 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 RALGAPA1Q6GYQ0 2036 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 ZDBF2Q9HCK1 2354 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 IGKV1D-43A0A0B4J1Z2 117 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SPAARA0A1B0GVQ0 90 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 LOC107986453A0A1B0GWG9 222 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 NAP1L6A6NFF2 107 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 ZNF814B7Z6K7 855 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 MASP2O00187 686 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SLC17A2O00624 439 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 NME2P1O60361 137 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 CYTIPO60759 359 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SRSF10O75494 262 aaKnown RBP9.86□□□□□ -0.83
SKA2-204ENST00000578519 KRT33AO76009 404 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SCGNO76038 276 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 FARS2O95363 451 aaKnown RBP9.86□□□□□ -0.83
SKA2-204ENST00000578519 PAHP00439 452 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 PNPP00491 289 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 ZNF24P17028 368 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 NME2P22392 152 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 GNALP38405 381 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 GFRA1P56159 465 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 CLDN15P56746 228 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 ARG2P78540 354 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 C19orf57Q0VDD7 668 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SCRN3Q0VDG4 424 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 DYRK1AQ13627 763 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 ODF4Q2M2E3 257 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 DOK3Q7L591 496 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 CDH24Q86UP0 819 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 LSRQ86X29 649 aaPredicted RBP9.86□□□□□ -0.83
SKA2-204ENST00000578519 MCEMP1Q8IX19 187 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 UBQLNLQ8IYU4 475 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 TMEM123Q8N131 208 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 TOMM5Q8N4H5 51 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 DUSP18Q8NEJ0 188 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 OR6M1Q8NGM8 313 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 LGALS14Q8TCE9 139 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 FCAMRQ8WWV6 532 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 TMEM45BQ96B21 275 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 HAVCR1Q96D42 359 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 SORCS2Q96PQ0 1159 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 RNF122Q9H9V4 155 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 ACKR4Q9NPB9 350 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 G6PC2Q9NQR9 355 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 DEPPQ9NTK1 212 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 MRPS7Q9Y2R9 242 aaKnown RBP9.86□□□□□ -0.83
SKA2-204ENST00000578519 FLVCR1Q9Y5Y0 555 aa9.86□□□□□ -0.83
SKA2-204ENST00000578519 A0A0A6YYH2 397 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 IGHV3-15A0A0B4J1V0 119 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 A0A0G2JMP0 313 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 A0A0X1KG70 313 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 LOC100289279A0A1B0GTE1 492 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 A0A1B0GTH9 108 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 LINC00854A0A1B0GVQ3 168 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 A6NJ64 397 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ARGFXA6NJG6 315 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 GABARAPH6UMI1 98 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 SMAD9O15198 467 aaKnown RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 ORC5O43913 435 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 MTRF1O75570 445 aaKnown RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 SLC34A2O95436 690 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 CST2P09228 141 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 RFPL3SP0C7P2 107 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 TRAPPC2P0DI81 140 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 TRAPPC2BP0DI82 140 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 MEOX1P50221 254 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 CLDN20P56880 219 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 PPIAP62937 165 aaKnown RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 MFGE8Q08431 387 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 TCF15Q12870 199 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 RNPS1Q15287 305 aaKnown RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 P2RY14Q15391 338 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 NRN1LQ496H8 165 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 TMEM69Q5SWH9 247 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 FAM27BQ5VT28 67 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 RSBN1Q5VWQ0 802 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 ABLIM2Q6H8Q1 611 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 CORO6Q6QEF8 472 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ABHD12BQ7Z5M8 362 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 NRARPQ7Z6K4 114 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 AKAP14Q86UN6 197 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 GGNQ86UU5 652 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 COMMD2Q86X83 199 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms