RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 RFPL4BQ6ZWI9 263 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 ZNF101Q8IZC7 436 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 RNF113BQ8IZP6 322 aaKnown RBP9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 ICA1LQ8NDH6 482 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 PTP4A1Q93096 173 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 ERGIC1Q969X5 290 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 HAVCR1Q96D42 359 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 MS4A7Q9GZW8 240 aaPredicted RBP9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 BATF3Q9NR55 127 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 RIMS3Q9UJD0 308 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 SNX5Q9Y5X3 404 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 A0A1B0GWJ7 208 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 AQP2P41181 271 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 CENPAP49450 140 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 NFYCQ13952 458 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 SGCAQ16586 387 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 CALHM3Q86XJ0 350 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 OR5L1Q8NGL2 311 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 GTF3AQ92664 365 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 PRRC1Q96M27 445 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 OR51B6Q9H340 312 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 ZNF69Q9UC07 566 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 NOP16Q9Y3C1 178 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 CACNG2Q9Y698 323 aa9.46□□□□□ -0.9
SMARCE1-214ENST00000578112 BBIP1A8MTZ0 92 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 SELEP16581 610 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 SRP9P49458 86 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 LSM6P62312 80 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 CD47Q08722 323 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 LEG1Q6P5S2 330 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 CELF2-AS1Q8N7Q2 184 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 LRRC75AQ8NAA5 344 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 RASD2Q96D21 266 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 SIGLEC11Q96RL6 698 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 EBF4Q9BQW3 602 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 POLE4Q9NR33 117 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 PPIAL4AQ9Y536 164 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 TMEM178BH3BS89 294 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 KPNA4O00629 521 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 NDUFAB1O14561 156 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 SLC2A10O95528 541 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 BPNT1O95861 308 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 OPN1SWP03999 348 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 F13BP05160 661 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 CCNOP22674 350 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 NPY4RP50391 375 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 PAX2Q02962 417 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 PSG7Q13046 419 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 AQP6Q13520 282 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 ENDOGQ14249 297 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 LSRQ86X29 649 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 AKR7LQ8NHP1 331 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 UQCC2Q9BRT2 126 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 ANKRD19PQ9H560 264 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 TRIM36Q9NQ86 728 aa9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 ARGLU1Q9NWB6 273 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 PAIP2BQ9ULR5 123 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-214ENST00000578112 IGHV2-70DA0A0C4DH43 119 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 TRAPPC2LH3BP13 241 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 ABHD16AO95870 558 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 WNT2P09544 360 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 SBK2P0C263 348 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 LAP3P28838 519 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 FBXW12Q6X9E4 464 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 RBM45Q8IUH3 476 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 PARP8Q8N3A8 854 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 OR52E2Q8NGJ4 325 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 OR4F5Q8NH21 305 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 DACT3Q96B18 629 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 NEIL1Q96FI4 390 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 FAM71F1Q96KD3 344 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 SSBP3Q9BWW4 388 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 BEX1Q9HBH7 125 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 PPP1R3CQ9UQK1 317 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 POMT1Q9Y6A1 747 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 FAM220BPB1ANY3 271 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 TIMM23O14925 209 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 KCNAB3O43448 404 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 MTPNP58546 118 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 PRKCDQ05655 676 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 MAPRE2Q15555 327 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 SLC9A3R2Q15599 337 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 KCNMB1Q16558 191 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 TMEM255AQ5JRV8 349 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 TSPYL5Q86VY4 417 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 NKAIN4Q8IVV8 208 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 OFCC1Q8IZS5 231 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 MOSPD2Q8NHP6 518 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 PFN4Q8NHR9 129 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 TMEM255BQ8WV15 326 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 RAB40AQ8WXH6 277 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 C1orf147Q96MC9 270 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-214ENST00000578112 COQ7Q99807 217 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms