RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC25A44Q96H78 314 aaPredicted RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 RACGAP1Q9H0H5 632 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 KAT8Q9H7Z6 458 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 NANSQ9NR45 359 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 C20orf141Q9NUB4 165 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 HIF1ANQ9NWT6 349 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SLC7A8Q9UHI5 535 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SH3GLB1Q9Y371 365 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 NDUFAF1Q9Y375 327 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 CACNG2Q9Y698 323 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 C17orf100A8MU93 164 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 B4DSR2 109 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 ANGPT2O15123 496 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 TRMUO75648 421 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 RP2O75695 350 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 OR7A10O76100 309 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 SLC2A10O95528 541 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 BAG2O95816 211 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 BCL10O95999 233 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 HIST1H2ABP04908 130 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 LCKP06239 509 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 MSMBP08118 114 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 MMP7P09237 267 aaPredicted RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 ASAH2BP0C7U1 165 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 OR8G3PP0DMU2 310 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 ACHEP22303 614 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 CCNOP22674 350 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 PCGF2P35227 344 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 OR1E2P47887 323 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 CTXN1P60606 82 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 RPS23P62266 143 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 FMODQ06828 376 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 RPL18Q07020 188 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 HIST3H3Q16695 136 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 TSTQ16762 297 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 SPRNQ5BIV9 151 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 SPATA46Q5T0L3 261 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 NANOGP8Q6NSW7 305 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 TMEM53Q6P2H8 277 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 HIST3H2AQ7L7L0 130 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 NANOGNBQ7Z5D8 188 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 PATL1Q86TB9 770 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 GLCCI1Q86VQ1 547 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 RFLNBQ8N5W9 214 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 CLDN22Q8N7P3 220 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 CPEB3Q8NE35 698 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 OR1J1Q8NGS3 322 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 AKR7LQ8NHP1 331 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 SYNPRQ8TBG9 265 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 ASB10Q8WXI3 467 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 NSMAFQ92636 917 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 HDAC2Q92769 488 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 HIST1H2ACQ93077 130 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 TMEM186Q96B77 213 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 ZNF426Q9BUY5 554 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 MRPL13Q9BYD1 178 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 RABEP2Q9H5N1 569 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 DENND2DQ9H6A0 471 aaPredicted RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 EVA1AQ9H8M9 152 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 NANOGQ9H9S0 305 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 CDH20Q9HBT6 801 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 HINT3Q9NQE9 182 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 INTS9Q9NV88 658 aaKnown RBP5.29□□□□□ -1.56
NUP88-212ENST00000576708 RIMS3Q9UJD0 308 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 ZNF229Q9UJW7 825 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 UGT2A1Q9Y4X1 527 aa5.29□□□□□ -1.56
NUP88-212ENST00000576708 IGLV3-9A0A075B6K5 115 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 LOC100509620A0A075B734 347 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 LOC105371242A0A075B767 164 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 A0A0G2JND7 137 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MCIDASD6RGH6 385 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 FXYD1O00168 92 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 SPRY3O43610 288 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MGRN1O60291 552 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 EDF1O60869 148 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 FAM20BO75063 409 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 TIPRLO75663 272 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 FARS2O95363 451 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 IGHG1P01857 330 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF250P15622 560 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ACADSP16219 412 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF32P17041 273 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ADRA2CP18825 462 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MAKP20794 623 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MPV17P39210 176 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 WNT5AP41221 380 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 YAP1P46937 504 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF84P51523 738 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 UCP2P55851 309 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 TMEM33P57088 247 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 KLF3P57682 345 aaPredicted RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 TAS2R41P59536 307 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 NHLH2Q02577 135 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MRPL28Q13084 256 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 SGCAQ16586 387 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 TBC1D28Q2M2D7 210 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 SLC36A2Q495M3 483 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 NRN1LQ496H8 165 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms