RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 HSPE1-MOB4S4R3N1 261 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 ADGRG4Q8IZF6 3080 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 PRR14LQ5THK1 2151 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 LOC100509620A0A075B734 347 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 A0A1W2PPR1 153 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 SYNGR3O43761 229 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 DOK2O60496 412 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 CTAG2O75638 210 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 GOSR1O95249 250 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 PTHP01270 115 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 CD3EP07766 207 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 SBK2P0C263 348 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 COX5BP10606 129 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 STOMP27105 288 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 APLNRP35414 380 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 HTR5AP47898 357 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 HSPA13P48723 471 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 NUDT6P53370 316 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 NR1H2P55055 460 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 TLE4Q04727 773 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 TMED1Q13445 227 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
NUP88-211ENST00000575976 SMN1Q16637 294 aaKnown RBP7.42□□□□□ -1.22
NUP88-211ENST00000575976 TBC1D28Q2M2D7 210 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ELFN2Q5R3F8 820 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 LAIR2Q6ISS4 152 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ADAM5Q6NVV9 412 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 SHFQ7M4L6 423 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 CDC20BQ86Y33 519 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 SLC35F2Q8IXU6 374 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ALDH16A1Q8IZ83 802 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 PAQR4Q8N4S7 273 aaPredicted RBP7.42□□□□□ -1.22
NUP88-211ENST00000575976 SLC30A7Q8NEW0 376 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 IL17RDQ8NFM7 739 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 KBTBD8Q8NFY9 601 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 OR51G2Q8NGK0 314 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 OR10S1Q8NGN2 331 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 OR1F12Q8NHA8 337 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 OTOSQ8NHW6 89 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ST7LQ8TDW4 575 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 THEM6Q8WUY1 208 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 NEUROG1Q92886 237 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 MARVELD3Q96A59 401 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 SLAMF6Q96DU3 332 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 RNFT2Q96EX2 444 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 C14orf79Q96F83 325 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 RADILQ96JH8 1075 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 POM121L2Q96KW2 1035 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 Q96MT0 163 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 AMELYQ99218 206 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 CNN2Q99439 309 aaKnown RBP7.42□□□□□ -1.22
NUP88-211ENST00000575976 TMEM204Q9BSN7 226 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ABHD6Q9BV23 337 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 YIPF3Q9GZM5 350 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 ADGRL4Q9HBW9 690 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 AMBNQ9NP70 447 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 PNRC2Q9NPJ4 139 aaKnown RBP7.42□□□□□ -1.22
NUP88-211ENST00000575976 CENPMQ9NSP4 180 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.42□□□□□ -1.22
NUP88-211ENST00000575976 COPS3Q9UNS2 423 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 KLHDC2Q9Y2U9 406 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 RNF115Q9Y4L5 304 aa7.42□□□□□ -1.22
NUP88-211ENST00000575976 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 C5orf49A4QMS7 147 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 OR6C6A6NF89 314 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 SNTNA6NMZ2 147 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 SHISA9B4DS77 424 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ATP6V1G2-DDX39BF2Z307 99 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 CRYAAP02489 173 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 LYNP07948 512 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 DBHP09172 617 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 DBTP11182 482 aaKnown RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 ZNF35P13682 527 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ALOX5APP20292 161 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 CCNOP22674 350 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ATP6V1E1P36543 226 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 MTNR1AP48039 350 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 GDI2P50395 445 aaKnown RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 HGFACQ04756 655 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ZNF91Q05481 1191 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 POU4F2Q12837 409 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 RAB35Q15286 201 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 RSPO1Q2MKA7 263 aaPredicted RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 SLC22A25Q6T423 547 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ZNF704Q6ZNC4 412 aaPredicted RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 SPATC1Q76KD6 591 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 THAP5Q7Z6K1 395 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ZNF454Q8N9F8 522 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 OR4F15Q8NGB8 312 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 OR1J2Q8NGS2 313 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 LILRB1Q8NHL6 650 aaPredicted RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 FBLIM1Q8WUP2 373 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 SLC7A6Q92536 515 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 TBX5Q99593 518 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 COQ7Q99807 217 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 KCNS3Q9BQ31 491 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ANKRD60Q9BZ19 345 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 TTTY10Q9BZA0 68 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 HDHD2Q9H0R4 259 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms