RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RASSF5Q8WWW0 418 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 LIPHQ8WWY8 451 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 ERGIC1Q969X5 290 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 SGTBQ96EQ0 304 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 ZNF582Q96NG8 517 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 TMEM246Q9BRR3 403 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 PCGF1Q9BSM1 259 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 PCDHAC1Q9H158 963 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 DPAGT1Q9H3H5 408 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 C16orf95Q9H693 158 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 MEPEQ9NQ76 525 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.5□□□□□ -1.21
SMG6-218ENST00000575454 ACOXLQ9NUZ1 547 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 BTBD17A6NE02 478 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 A6NIZ1 184 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 PIP5K1CO60331 668 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 TOX4O94842 621 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 TSPAN15O95858 294 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 CYB5R3P00387 301 aaPredicted RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 THY1P04216 161 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 HTR5AP47898 357 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 RGS6P49758 472 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 RAP1BP61224 184 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 RAP1AP62834 184 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 FMODQ06828 376 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 MPP2Q14168 576 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 CYP51A1Q16850 503 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 C11orf91Q3C1V1 193 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 METTL11BQ5VVY1 283 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 BLOC1S3Q6QNY0 202 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 DCDC5Q6ZRR9 648 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 FOXL2NBQ6ZUU3 175 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 CROCCP2Q86T23 111 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 LDLRAD3Q86YD5 345 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 PNLDC1Q8NA58 520 aaKnown RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 PCYOX1LQ8NBM8 494 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 OR8G5Q8NG78 346 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 C10orf82Q8WW14 230 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 HDAC2Q92769 488 aaKnown RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 PPP1R14AQ96A00 147 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 RASD2Q96D21 266 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 SPDL1Q96EA4 605 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 OR52B2Q96RD2 323 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 POLR2J2Q9GZM3 115 aaKnown RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 POLR2J3Q9H1A7 115 aaKnown RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 VAPAQ9P0L0 249 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 ERVK-18Q9QC07 812 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 STARD10Q9Y365 291 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 CAB39Q9Y376 341 aaPredicted RBP7.49□□□□□ -1.21
SMG6-218ENST00000575454 WNK2Q9Y3S1 2297 aa7.49□□□□□ -1.21
SMG6-218ENST00000575454 IGKV1D-43A0A0B4J1Z2 117 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 IGHV1-69DA0A0B4J2H0 117 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 CENPVL3A0A0U1RRI6 287 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 A0A1W2PPL8 197 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 SGCEO43556 437 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 DOK2O60496 412 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 ZNF205O95201 554 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 IGHV1-69P01742 117 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 OPN1MWP04001 364 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 TSPAN19P0C672 248 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 THRBP10828 461 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 CFHR2P36980 270 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 GATA4P43694 442 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 IER3P46695 156 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 RPL27P61353 136 aaKnown RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 HNRNPA0Q13151 305 aaKnown RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 ALG10Q5BKT4 473 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 INTS11Q5TA45 600 aaKnown RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 FBXW12Q6X9E4 464 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 Q6ZPA2 131 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 RBM45Q8IUH3 476 aaKnown RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 C10orf111Q8N326 155 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 GALNT4Q8N4A0 578 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 CELF2-AS1Q8N7Q2 184 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 GPR32P1Q8NGA4 272 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 OR11L1Q8NGX0 322 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 ZNF420Q8TAQ5 688 aaPredicted RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 Q8TCH9 128 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 SLC26A7Q8TE54 656 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 AENQ8WTP8 325 aaKnown RBP7.48□□□□□ -1.21
SMG6-218ENST00000575454 TMEM239Q8WW34 195 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 CDADC1Q9BWV3 514 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 CENPHQ9H3R5 247 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 TRIM36Q9NQ86 728 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 POLE4Q9NR33 117 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 FAM96BQ9Y3D0 163 aa7.48□□□□□ -1.21
SMG6-218ENST00000575454 TRBV5-3A0A0A0MS03 114 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 NDUFA2O43678 99 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 AHCYL1O43865 530 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 TSPAN9O75954 239 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 OR5F1O95221 314 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ECDO95905 644 aaPredicted RBP7.47□□□□□ -1.21
SMG6-218ENST00000575454 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 OPN1SWP03999 348 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms