RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 YIPF7Q8N8F6 280 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 RELL2Q8NC24 303 aaPredicted RBP21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 GALNT11Q8NCW6 608 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 RNF133Q8WVZ7 376 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 PELI1Q96FA3 418 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 MGLLQ99685 303 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 PIGMQ9H3S5 423 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 ELOVL3Q9HB03 270 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 NBASA2RRP1 2371 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 CIB4A0PJX0 185 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF503-AS2A6NEH8 195 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 METTL15A6NJ78 407 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 E9PI62 339 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 DVL2O14641 736 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 MSTNO14793 375 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 ABHD16AO95870 558 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 HLA-HP01893 362 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF32P17041 273 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 TUBA1BP68363 451 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 ROM1Q03395 351 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 TUBA1AQ71U36 451 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 VASH1Q7L8A9 365 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 FAM220AQ7Z4H9 259 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 GJC3Q8NFK1 279 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 PRR7Q8TB68 274 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 KCNN2Q9H2S1 579 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 PNRC2Q9NPJ4 139 aaKnown RBP21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 BABAM2Q9NXR7 383 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 GRIP1Q9Y3R0 1128 aa21.03■□□□□ 0.96
ATPAF1-213ENST00000574428 A0A1W2PPW3 197 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 B8ZZF3 427 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 PSMB10P40306 273 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 HIST1H3AP68431 136 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 P2RY6Q15077 328 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 GABRA6Q16445 453 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 TBRG1Q3YBR2 411 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 ARMCX4Q5H9R4 360 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 HIST2H3PS2Q5TEC6 136 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 OR7E24Q6IFN5 339 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 HIST2H3AQ71DI3 136 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF679Q8IYX0 411 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 ZFP41Q8N8Y5 198 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 OPALINQ96PE5 141 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 DCUN1D5Q9BTE7 237 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 MROQ9BYG7 248 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 SLC5A6Q9Y289 635 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 LRP12Q9Y561 859 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 KMT2BQ9UMN6 2715 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 A8MXE2 369 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 SULT1C4O75897 302 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 RPP14O95059 124 aaKnown RBP21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 MMP7P09237 267 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 NR4A1P22736 598 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 TGFBR2P37173 567 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 OPRL1P41146 370 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 PCBD1P61457 104 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 CCDC92Q53HC0 331 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 SOWAHCQ53LP3 525 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF843Q8N446 348 aa21.02■□□□□ 0.96
ATPAF1-213ENST00000574428 PNMA8CA0A1B0GUJ8 204 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 H2BFMP0C1H6 154 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 CD79AP11912 226 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 SCRN3Q0VDG4 424 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 SLC36A2Q495M3 483 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 LIPNQ5VXI9 398 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 ZNF774Q6NX45 483 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 MRGPRGQ86SM5 289 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 NOX3Q9HBY0 568 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 GALNT8Q9NY28 637 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 PLEK2Q9NYT0 353 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 FBXL3Q9UKT7 428 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 TIMM10BQ9Y5J6 103 aa21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 NCOA6Q14686 2063 aaPredicted RBP21.01■□□□□ 0.95
ATPAF1-213ENST00000574428 ZNF878C9JN71 531 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 LRRTM2O43300 516 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 C1QL1O75973 258 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 GABARAPO95166 117 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 TACSTD2P09758 323 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 PSG4Q00888 419 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 CTF1Q16619 201 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 TSTQ16762 297 aaKnown RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 SFRP5Q5T4F7 317 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 KCTD20Q7Z5Y7 419 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 SYT9Q86SS6 491 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 AKR7LQ8NHP1 331 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 OR2H1Q9GZK4 316 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 RNF121Q9H920 327 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 TRIM36Q9NQ86 728 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 CACNA1CQ13936 2221 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 SGCEO43556 437 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 LIPAP38571 399 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 GBX2P52951 348 aaPredicted RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 ADORA2A-AS1P86434 159 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 MLLT11Q13015 90 aaPredicted RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 ELFN2Q5R3F8 820 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 P2RY8Q86VZ1 359 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 C1orf162Q8NEQ5 155 aaPredicted RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 HSD17B8Q92506 261 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 RNF166Q96A37 237 aaPredicted RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 CCDC120Q96HB5 630 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms