RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SLC22A24Q8N4F4 322 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 NOXO1Q8NFA2 376 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 OR52L1Q8NGH7 329 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 OR8J1Q8NGP2 316 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SLC7A13Q8TCU3 470 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 TMEM239Q8WW34 195 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ACOT11Q8WXI4 607 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SGTBQ96EQ0 304 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 FOXN4Q96NZ1 517 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 DOK1Q99704 481 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SH3GL3Q99963 347 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PRSS27Q9BQR3 290 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 DCUN1D5Q9BTE7 237 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF426Q9BUY5 554 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 BEX2Q9BXY8 128 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SHARPINQ9H0F6 387 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 MEPEQ9NQ76 525 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 INIPQ9NRY2 104 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 TBC1D23Q9NUY8 699 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PAK1IP1Q9NWT1 392 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 B3GNT2Q9NY97 397 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ERVK-18Q9QC07 812 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ENPP5Q9UJA9 477 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 KCNS2Q9ULS6 477 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 FZR1Q9UM11 496 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 IGHV4-61A0A0C4DH41 118 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 LOC100289279A0A1B0GTE1 492 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 A0A1W2PPW3 197 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 VWC2LB2RUY7 222 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 E9PQ18 207 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 M0R233 179 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SYNGR3O43761 229 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 LMX1BO60663 402 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 WBP4O75554 376 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 OR7A10O76100 309 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SOX14O95416 240 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 CDK1P06493 297 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 HTR1AP08908 422 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 QDPRP09417 244 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 PGA4P0DJD7 388 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 PGA3P0DJD8 388 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 FUT1P19526 365 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 DAP3P51398 398 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SNRPGP62308 76 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 EMX1Q04741 257 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SEC23BQ15437 767 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 TIMM50Q3ZCQ8 353 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SLC36A2Q495M3 483 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 C12orf73Q69YU5 71 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SLC27A4Q6P1M0 643 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 C1orf94Q6P1W5 598 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 CXXC5Q7LFL8 322 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SLC16A14Q7RTX9 510 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SKA3Q8IX90 412 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SYT14Q8NB59 555 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 RHOXF1Q8NHV9 184 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 APH1BQ8WW43 257 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 MRPL24Q96A35 216 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 MDFIQ99750 246 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 MRPL37Q9BZE1 423 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 OR51B6Q9H340 312 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 CDH20Q9HBT6 801 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 SLC25A19Q9HC21 320 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 ACOT13Q9NPJ3 140 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 C20orf141Q9NUB4 165 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 TMEM38BQ9NVV0 291 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 ZNF224Q9NZL3 707 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 LPAR3Q9UBY5 353 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 MED31Q9Y3C7 131 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 RPL36Q9Y3U8 105 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 ATRQ13535 2644 aa8.33□□□□□ -1.08
NPLOC4-216ENST00000574344 FBN1P35555 2871 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 IQCMA0A1B0GVH7 501 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 RNF212BA8MTL3 300 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 MYL12BO14950 172 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 GABARAPO95166 117 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 FAM157BP0CG42 384 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 FAM157CP0CG43 387 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 SAGP10523 405 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 NR2C1P13056 603 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 MYL12AP19105 171 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 HNF1AP20823 631 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 PCMT1P22061 227 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 FPR3P25089 353 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 EPHA2P29317 976 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 GLRXP35754 106 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 AQP2P41181 271 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 HSF2Q03933 536 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 PLP2Q04941 152 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 TSPAN31Q12999 210 aa8.32□□□□□ -1.08
NPLOC4-216ENST00000574344 SMN1Q16637 294 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms