RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 BGLAPP02818 100 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 PIPP12273 146 aaPredicted RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 GABRA5P31644 462 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 ART1P52961 327 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 RPS23P62266 143 aaKnown RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 KCNJ8Q15842 424 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 OR14A2Q96R54 314 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 PRSS27Q9BQR3 290 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 TP63Q9H3D4 680 aaPredicted RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 NELFAQ9H3P2 528 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 DUSP21Q9H596 190 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 MAN2C1Q9NTJ4 1040 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 NOP16Q9Y3C1 178 aaKnown RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 MSRB2Q9Y3D2 182 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 ISPDA4D126 451 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 GPANK1O95872 356 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 RFPL3SP0C7P2 107 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 PGAM2P15259 253 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 RPS4Y1P22090 263 aaKnown RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 FABP6P51161 128 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 SLC25A1P53007 311 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 RPS25P62851 125 aaKnown RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 RIPPLY1Q0D2K3 151 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 GSG1Q2KHT4 349 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 ANKRD16Q6P6B7 361 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 TMEM17Q86X19 198 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 OR5AS1Q8N127 324 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 IL17RDQ8NFM7 739 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 OR5D18Q8NGL1 313 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 SLC22A4Q9H015 551 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 ZNF407Q9C0G0 2248 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ARID1AO14497 2285 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SCN8AQ9UQD0 1980 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 LRRTM2O43300 516 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SCG5P05408 212 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 CCBE1Q6UXH8 406 aaPredicted RBP9.01□□□□□ -0.97
SMG6-213ENST00000573166 TOMM5Q8N4H5 51 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 NANOGP1Q8N7R0 232 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 OR51E1Q8TCB6 317 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ZNF701M0R085 212 aaPredicted RBP9.01□□□□□ -0.97
SMG6-213ENST00000573166 HLA-DOBP13765 273 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 PMPCAQ10713 525 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SRSF6Q13247 344 aaKnown RBP9.01□□□□□ -0.97
SMG6-213ENST00000573166 P2RY14Q15391 338 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ELFN2Q5R3F8 820 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 USP51Q70EK9 711 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ACOT12Q8WYK0 555 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SIGLEC11Q96RL6 698 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 UBL7Q96S82 380 aaPredicted RBP9.01□□□□□ -0.97
SMG6-213ENST00000573166 GPA33Q99795 319 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SMURF1Q9HCE7 757 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 KCNMB2Q9Y691 235 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 OR6C6A6NF89 314 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ZIC2O95409 532 aaPredicted RBP9.01□□□□□ -0.97
SMG6-213ENST00000573166 PATE4P0C8F1 98 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 OPRM1P35372 400 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 PTGER4P35408 488 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ZNF83P51522 516 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 KLRB1Q12918 225 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 ETFDHQ16134 617 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 WDSUB1Q8N9V3 476 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 MUL1Q969V5 352 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 KCNJ16Q9NPI9 418 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 SLCO1C1Q9NYB5 712 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 IGF2RP11717 2491 aa9.01□□□□□ -0.97
SMG6-213ENST00000573166 TRAPPC2LH3BP13 241 aa9□□□□□ -0.97
SMG6-213ENST00000573166 CTDSP2O14595 271 aa9□□□□□ -0.97
SMG6-213ENST00000573166 RER1O15258 196 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SLC19A2O60779 497 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ZNF44P15621 663 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ARSBP15848 533 aa9□□□□□ -0.97
SMG6-213ENST00000573166 PRKACBP22694 351 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SCGB2B2Q4G0G5 96 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SLC46A3Q7Z3Q1 461 aa9□□□□□ -0.97
SMG6-213ENST00000573166 RDH10Q8IZV5 341 aa9□□□□□ -0.97
SMG6-213ENST00000573166 OR52H1Q8NGJ2 320 aa9□□□□□ -0.97
SMG6-213ENST00000573166 OR51T1Q8NGJ9 327 aa9□□□□□ -0.97
SMG6-213ENST00000573166 RFT1Q96AA3 541 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
SMG6-213ENST00000573166 VRK1Q99986 396 aaPredicted RBP9□□□□□ -0.97
SMG6-213ENST00000573166 PDCD10Q9BUL8 212 aa9□□□□□ -0.97
SMG6-213ENST00000573166 NOX4Q9NPH5 578 aa9□□□□□ -0.97
SMG6-213ENST00000573166 DLL3Q9NYJ7 618 aa9□□□□□ -0.97
SMG6-213ENST00000573166 PCDHB10Q9UN67 800 aa9□□□□□ -0.97
SMG6-213ENST00000573166 PIGLQ9Y2B2 252 aa9□□□□□ -0.97
SMG6-213ENST00000573166 FAM208BQ5VWN6 2430 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ESPL1Q14674 2120 aa9□□□□□ -0.97
SMG6-213ENST00000573166 LOC107986453A0A1B0GWG9 222 aa9□□□□□ -0.97
SMG6-213ENST00000573166 NPIPB9F8W1W9 429 aa9□□□□□ -0.97
SMG6-213ENST00000573166 H3BUI4 141 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ZNF32P17041 273 aa9□□□□□ -0.97
SMG6-213ENST00000573166 IL11P20809 199 aa9□□□□□ -0.97
SMG6-213ENST00000573166 CD40LGP29965 261 aa9□□□□□ -0.97
SMG6-213ENST00000573166 GLP1RP43220 463 aa9□□□□□ -0.97
SMG6-213ENST00000573166 CD83Q01151 205 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SLC17A1Q14916 467 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms