RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MCUR1Q96AQ8 359 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 Q96M85 177 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 NSMCE2Q96MF7 247 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 WACQ9BTA9 647 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 BPESC1Q9GZL8 116 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 NDEL1Q9GZM8 345 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 OR51B6Q9H340 312 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 KRCC1Q9NPI7 259 aaPredicted RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 NDE1Q9NXR1 346 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 TAAR3PQ9P1P4 343 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 MYEF2Q9P2K5 600 aaKnown RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 EIF3KQ9UBQ5 218 aaKnown RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 GPR160Q9UJ42 338 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 MAGEL2Q9UJ55 1249 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 AURKCQ9UQB9 309 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 SIGLEC7Q9Y286 467 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 ADAM18Q9Y3Q7 739 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 TLN2Q9Y4G6 2542 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 ZANQ9Y493 2812 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ABCA1O95477 2261 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 IGLV3-9A0A075B6K5 115 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LOC100509620A0A075B734 347 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 IGHV4-61A0A0C4DH41 118 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 TRBV4-1A0A0J9YWV2 114 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 A0A1W2PPL8 197 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 A0A1W2PPW3 197 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 C5orf49A4QMS7 147 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 UNC119BA6NIH7 251 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 C12orf71A8MTZ7 269 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LYNX1G3V0Z9 82 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 H7C1C5 153 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LMX1BO60663 402 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 GADD45GO95257 159 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 CLPTM1O96005 669 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LYNX1P0DP58 116 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ZNF250P15622 560 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ZNF23P17027 643 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ZNF26P17031 533 aaPredicted RBP6.36□□□□□ -1.39
NUP88-205ENST00000572809 MSR1P21757 451 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LIMS1P48059 325 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 GDI2P50395 445 aaKnown RBP6.36□□□□□ -1.39
NUP88-205ENST00000572809 ERVS71-1P61550 626 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 LCN6P62502 163 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 MAD2L1BPQ15013 274 aaPredicted RBP6.36□□□□□ -1.39
NUP88-205ENST00000572809 SEC23BQ15437 767 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 MOGQ16653 247 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ALKBH6Q3KRA9 238 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ZNF718Q3SXZ3 478 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 CHRFAM7AQ494W8 412 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 MESTQ5EB52 335 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ELFN2Q5R3F8 820 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 GPR139Q6DWJ6 353 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 UNQ6126/PRO20091Q6UXV3 157 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 FOXL2NBQ6ZUU3 175 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 FAM122BQ7Z309 247 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 CLRN3Q8NCR9 226 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ICA1LQ8NDH6 482 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 OR1J1Q8NGS3 322 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 AKR7LQ8NHP1 331 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 RDH5Q92781 318 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 NSL1Q96IY1 281 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 POM121L2Q96KW2 1035 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 ZNF570Q96NI8 536 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 CCT8L2Q96SF2 557 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 OR2H1Q9GZK4 316 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 WNT5BQ9H1J7 359 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 NRIP3Q9NQ35 241 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 TMEM160Q9NX00 188 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 SLCO1C1Q9NYB5 712 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 IER3IP1Q9Y5U9 82 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 V9GYQ6 96 aa6.36□□□□□ -1.39
NUP88-205ENST00000572809 YLPM1P49750 1951 aaKnown RBP6.36□□□□□ -1.39
NUP88-205ENST00000572809 PRSS37A4D1T9 235 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 LRP5LA4QPB2 252 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 C17orf100A8MU93 164 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SOCS2O14508 198 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ARPC2O15144 300 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 OR10H3O60404 316 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SLC16A7O60669 478 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 KHDRBS3O75525 346 aaKnown RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 TGFAP01135 160 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 IFNA2P01563 188 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 IGHV3-13P01766 116 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SEMG1P04279 462 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 FABP3P05413 133 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 TACSTD2P09758 323 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 GCH1P30793 250 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SDHAP31040 664 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 IFNGR2P38484 337 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 RPS6KA3P51812 740 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 CHN2P52757 468 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 TMEM33P57088 247 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 KLF3P57682 345 aaPredicted RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 SPIBQ01892 262 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 RIN1Q13671 783 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ENDOGQ14249 297 aaKnown RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 KIR3DS1Q14943 382 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 RFX4Q33E94 735 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms