RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
CHD3-214ENST00000572579 WACQ9BTA9 647 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 RERGLQ9H628 205 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 MMP26Q9NRE1 261 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 RPS6KA6Q9UK32 745 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 TMEM5Q9Y2B1 443 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 WNK2Q9Y3S1 2297 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 UNC119BA6NIH7 251 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 XKRYO14609 159 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 TIMM8AO60220 97 aaPredicted RBP15.27■□□□□ 0.04
CHD3-214ENST00000572579 FSHBP01225 129 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 LSM6P62312 80 aaKnown RBP15.27■□□□□ 0.04
CHD3-214ENST00000572579 HIST1H3AP68431 136 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 LCN2P80188 198 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 AQP6Q13520 282 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 FGD3Q5JSP0 725 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 HIST2H3PS2Q5TEC6 136 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 GPR139Q6DWJ6 353 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 C1orf94Q6P1W5 598 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 UNQ6126/PRO20091Q6UXV3 157 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 DPY19L2P2Q6ZN68 376 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 HIST2H3AQ71DI3 136 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 RRM2BQ7LG56 351 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 CYP4Z1Q86W10 505 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 ZNF283Q8N7M2 679 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 OR2Z1Q8NG97 314 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 RAB39BQ96DA2 213 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 TIMD4Q96H15 378 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 GAL3ST1Q99999 423 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 EGLN1Q9GZT9 426 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 GORASP2Q9H8Y8 452 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 MED4Q9NPJ6 270 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 TMEM106BQ9NUM4 274 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 PLEK2Q9NYT0 353 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 NPTNQ9Y639 398 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 LHFPL6Q9Y693 200 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 V9GYQ6 96 aa15.27■□□□□ 0.04
CHD3-214ENST00000572579 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 IGLV1-36A0A0B4J1U3 117 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 TRAPPC2LH3BP13 241 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 PPP1R3DO95685 299 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 SBK2P0C263 348 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 EPHA1P21709 976 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 SEC61A1P61619 476 aaKnown RBP15.26■□□□□ 0.03
CHD3-214ENST00000572579 KRTAP27-1Q3LI81 207 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 CORO6Q6QEF8 472 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 C1QL2Q7Z5L3 287 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 OR6V1Q8N148 313 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 CMTM5Q96DZ9 223 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 SAMD8Q96LT4 415 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 SPAG4Q9NPE6 437 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 ESM1Q9NQ30 184 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 UBAP1Q9NZ09 502 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 ADA2Q9NZK5 511 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 CGGBP1Q9UFW8 167 aaPredicted RBP15.26■□□□□ 0.03
CHD3-214ENST00000572579 CD300AQ9UGN4 299 aa15.26■□□□□ 0.03
CHD3-214ENST00000572579 FAM32AQ9Y421 112 aaKnown RBP15.26■□□□□ 0.03
CHD3-214ENST00000572579 A0A0G2JMP0 313 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 A0A0X1KG70 313 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 SNX3O60493 162 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 PRDX6P30041 224 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 HILS1P60008 231 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 ZMYND11Q15326 602 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 TUSC1Q2TAM9 212 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 RFX4Q33E94 735 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 HSP90B2PQ58FF3 399 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 SHQ1Q6PI26 577 aaKnown RBP15.25■□□□□ 0.03
CHD3-214ENST00000572579 ARL9Q6T311 187 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 OR5AS1Q8N127 324 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 NPEPL1Q8NDH3 523 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 DEFB108BQ8NET1 73 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 OR4M2Q8NGB6 313 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 ITLN1Q8WWA0 313 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 PTP4A1Q93096 173 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 DIRC2Q96SL1 478 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 B9D1Q9UPM9 204 aa15.25■□□□□ 0.03
CHD3-214ENST00000572579 ISPDA4D126 451 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 H0YL77 283 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 GSTM3P21266 225 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 TUBG1P23258 451 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 ANOS1P23352 680 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 DCAF12L2Q5VW00 463 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 OR2T2Q6IF00 324 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 SMARCD3Q6STE5 483 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 USP43Q70EL4 1123 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.24■□□□□ 0.03
CHD3-214ENST00000572579 PEG10Q86TG7 708 aaKnown RBP15.24■□□□□ 0.03
CHD3-214ENST00000572579 ADCK1Q86TW2 530 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 NAA40Q86UY6 237 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 LRRC28Q86X40 367 aaPredicted RBP15.24■□□□□ 0.03
CHD3-214ENST00000572579 ZFAND2BQ8WV99 257 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 DVL3Q92997 716 aaPredicted RBP15.24■□□□□ 0.03
CHD3-214ENST00000572579 PYURFQ96I23 114 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 ERMAPQ96PL5 475 aaPredicted RBP15.24■□□□□ 0.03
CHD3-214ENST00000572579 NMNAT3Q96T66 252 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 SLC6A7Q99884 636 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 FAM107BQ9H098 131 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 C7orf69Q9H7B7 122 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 SRA1Q9HD15 236 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms