RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 DLGAP1O14490 977 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 TNFRSF13BO14836 293 aaPredicted RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 GMNNO75496 209 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 KCNK2O95069 426 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 NKX2-2O95096 273 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 PMS2P2O95744 297 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 CLPTM1O96005 669 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 HNRNPCP07910 306 aaKnown RBP eCLIP5.73□□□□□ -1.49
CHD3-213ENST00000571249 LYNP07948 512 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 ZNF35P13682 527 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 NCK1P16333 377 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 FAHP16930 419 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 GABRA5P31644 462 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 IER3P46695 156 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 CAPZA2P47755 286 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 MVDP53602 400 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 BPIFB3P59826 476 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 RPS23P62266 143 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 GNB2P62879 340 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 MERTKQ12866 999 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 FADDQ13158 208 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 DCTN2Q13561 401 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 RAB32Q13637 225 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 SLC17A1Q14916 467 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 VMACQ2NL98 169 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 FAM98BQ52LJ0 330 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 ZNF385BQ569K4 471 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 CCNJQ5T5M9 372 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 FRRS1Q6ZNA5 592 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 Q6ZS46 218 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 ZBTB49Q6ZSB9 765 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 LINGO2Q7L985 606 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 KRT74Q7RTS7 529 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 AMIGO2Q86SJ2 522 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 PTOV1Q86YD1 416 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 EPHX4Q8IUS5 362 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 C10orf111Q8N326 155 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 GALNT4Q8N4A0 578 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 PSMA8Q8TAA3 256 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 SNX33Q8WV41 574 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 RAB24Q969Q5 203 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 EME1Q96AY2 570 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 TMEM45BQ96B21 275 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 ELP4Q96EB1 424 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 NEURL3Q96EH8 262 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 ALKBH3Q96Q83 286 aaPredicted RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 TSPAN32Q96QS1 320 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 PANX1Q96RD7 426 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 DCLRE1CQ96SD1 692 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 SLC29A1Q99808 456 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 CHID1Q9BWS9 393 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 EBPLQ9BY08 206 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 LAT2Q9GZY6 243 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 SAP30LQ9HAJ7 183 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 TPT1P8Q9HAU6 139 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 DNAJB9Q9UBS3 223 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 FBLN5Q9UBX5 448 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 IL20RAQ9UHF4 553 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 GPR160Q9UJ42 338 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 DSPPQ9NZW4 1301 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 HSPG2P98160 4391 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 IGHV2-70DA0A0C4DH43 119 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 H3BNH8 94 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ETV2O00321 342 aaPredicted RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 DNPH1O43598 174 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 UPK3AO75631 287 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ACTL6BO94805 426 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 HPRP00739 348 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SEMG1P04279 462 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 CHRM2P08172 466 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 CD28P10747 220 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 DDCP20711 480 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 LCN1P31025 176 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 CCR4P51679 360 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 PAX2Q02962 417 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SLC3A1Q07837 685 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 RBBP4Q09028 425 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 C2orf80Q0P641 193 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 HABP2Q14520 560 aaPredicted RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 RGNQ15493 299 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 LRRC36Q1X8D7 754 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ESCO2Q56NI9 601 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ZNF621Q6ZSS3 439 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 CBLL1Q75N03 491 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 PIWIL3Q7Z3Z3 882 aaKnown RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 ANKRD46Q86W74 232 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 CLECL1Q8IZS7 167 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 KLHL36Q8N4N3 616 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SPICQ8N5J4 248 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 KLHDC1Q8N7A1 406 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ZIC4Q8N9L1 334 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 OR5W2Q8NH69 310 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SLC25A43Q8WUT9 341 aaPredicted RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 TFAP2CQ92754 450 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 PPCDCQ96CD2 204 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 RDH12Q96NR8 316 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 ZNF385AQ96PM9 386 aaKnown RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 OSBPL10Q9BXB5 764 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms