RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 C12orf71A8MTZ7 269 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
CCDC40-205ENST00000571028 PRKYO43930 277 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 SNAP29O95721 258 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CECR9P0C854 216 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CCL2P13500 99 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF32P17041 273 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CD40P25942 277 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CDH11P55287 796 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 TEKQ02763 1124 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 GLO1Q04760 184 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 AGAP6Q5VW22 663 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CORO6Q6QEF8 472 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
CCDC40-205ENST00000571028 MYPOPQ86VE0 399 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-205ENST00000571028 LINC00346Q8IVM7 164 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 TCEANCQ8N8B7 351 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF511Q8NB15 262 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 BOD1Q96IK1 185 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 MBOAT4Q96T53 435 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 CDADC1Q9BWV3 514 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 GABARAPL3Q9BY60 117 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 PRRG3Q9BZD7 231 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 RACGAP1Q9H0H5 632 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 HINT3Q9NQE9 182 aaKnown RBP11.51□□□□□ -0.57
CCDC40-205ENST00000571028 B3GNT2Q9NY97 397 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
CCDC40-205ENST00000571028 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ATP6V1G2-DDX39BF2Z307 99 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 TFP02787 698 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 CST2P09228 141 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF823P16415 610 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 CCNOP22674 350 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 PTAFRP25105 342 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 APEX1P27695 318 aaKnown RBP11.5□□□□□ -0.57
CCDC40-205ENST00000571028 FMO3P31513 532 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 RPS27P42677 84 aaKnown RBP11.5□□□□□ -0.57
CCDC40-205ENST00000571028 GZMKP49863 264 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 SLC25A1P53007 311 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 PLP2Q04941 152 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 SLC34A1Q06495 639 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 RAB35Q15286 201 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 FAM120AOSQ5T036 256 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF774Q6NX45 483 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 SSX8Q7RTT4 187 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ZBTB46Q86UZ6 589 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 FAM81AQ8TBF8 368 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 FAM168AQ92567 244 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ZMYND19Q96E35 227 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-205ENST00000571028 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 NMNAT2Q9BZQ4 307 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 RNPEPL1Q9HAU8 725 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-205ENST00000571028 ASH2LQ9UBL3 628 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
CCDC40-205ENST00000571028 TIMM10BQ9Y5J6 103 aa11.5□□□□□ -0.57
CCDC40-205ENST00000571028 A0A096LNT2 108 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 TCF21O43680 179 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 MGRN1O60291 552 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
CCDC40-205ENST00000571028 SPARCP09486 303 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 GAAP10253 952 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
CCDC40-205ENST00000571028 PCBD1P61457 104 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 PSG4Q00888 419 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 NAAAQ02083 359 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 DEPDC4Q8N2C3 294 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF525Q8N782 197 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF555Q8NEP9 628 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 SLC26A10Q8NG04 563 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 OR2AJ1Q8NGZ0 328 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 UBE2FQ969M7 185 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 OR2H1Q9GZK4 316 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 WNT5BQ9H1J7 359 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 OR51B6Q9H340 312 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 WDR76Q9H967 626 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 CDH20Q9HBT6 801 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 MRPL22Q9NWU5 206 aaKnown RBP11.49□□□□□ -0.57
CCDC40-205ENST00000571028 IMPAD1Q9NX62 359 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 SMPD3Q9NY59 655 aaPredicted RBP11.49□□□□□ -0.57
CCDC40-205ENST00000571028 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
CCDC40-205ENST00000571028 PRR14LQ5THK1 2151 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 LOC100289279A0A1B0GTE1 492 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 RER1O15258 196 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 SGCEO43556 437 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 DOK2O60496 412 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms