RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 HOXC12P31275 282 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 OPRL1P41146 370 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 PCBD1P61457 104 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 HIST1H3AP68431 136 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 ROM1Q03395 351 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 SPHARQ15513 63 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 SLC25A35Q3KQZ1 300 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 SFRP5Q5T4F7 317 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 HIST2H3PS2Q5TEC6 136 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 UBE2UQ5VVX9 321 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 ZNF774Q6NX45 483 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 STAC2Q6ZMT1 411 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 HIST2H3AQ71DI3 136 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 KLBQ86Z14 1044 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 SYS1Q8N2H4 156 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 C17orf78Q8N4C9 275 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 YIPF7Q8N8F6 280 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 AKR7LQ8NHP1 331 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 GATAD2BQ8WXI9 593 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 PELI1Q96FA3 418 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 MRPL48Q96GC5 212 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 WNT5BQ9H1J7 359 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 KCNN2Q9H2S1 579 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 ELOVL3Q9HB03 270 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 DDX28Q9NUL7 540 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 COQ3Q9NZJ6 369 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 FREM1Q5H8C1 2179 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 NBASA2RRP1 2371 aa10.06□□□□□ -0.8
CALCOCO2-225ENST00000570513 INTS1Q8N201 2190 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ARPC4-TTLL3A0A0A6YYG9 625 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 METTL15A6NJ78 407 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 E9PI62 339 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 SULT1C4O75897 302 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 LALBAP00709 142 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 TFAP2AP05549 437 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 H2BFMP0C1H6 154 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 HSMCR30P0CW71 290 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 JUNBP17275 347 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 PSMB1P20618 241 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 PSMB10P40306 273 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 HTR5AP47898 357 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ASCL1P50553 236 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 NR1H2P55055 460 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 GP2P55259 537 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 UBE2NP61088 152 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 PSG4Q00888 419 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 MFGE8Q08431 387 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 FAM27E3Q08E93 113 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 BLMHQ13867 455 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 TIGD6Q17RP2 521 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 GSG1Q2KHT4 349 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ELFN2Q5R3F8 820 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 TMEM53Q6P2H8 277 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 MTFR2Q6P444 385 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 KCTD18Q6PI47 426 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 SYT9Q86SS6 491 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 MDP1Q86V88 176 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ZNF679Q8IYX0 411 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ZFP41Q8N8Y5 198 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 GJC3Q8NFK1 279 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ASB5Q8WWX0 329 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 HSD17B8Q92506 261 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 S100PBPQ96BU1 408 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 OPALINQ96PE5 141 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 MYCBPQ99417 103 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ATF6BQ99941 703 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 MROQ9BYG7 248 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ACTR6Q9GZN1 396 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 HDHD2Q9H0R4 259 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 RNF121Q9H920 327 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 TRIM36Q9NQ86 728 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 SLC17A5Q9NRA2 495 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 FBXL3Q9UKT7 428 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 SLC5A6Q9Y289 635 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 TIMM10BQ9Y5J6 103 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 KALRNO60229 2985 aa10.05□□□□□ -0.8
CALCOCO2-225ENST00000570513 NKX2-6A6NCS4 301 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 OR5H1A6NKK0 313 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 PYCARD-AS1I3L0S3 204 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 SYNGR3O43761 229 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 RPP14O95059 124 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 ARR3P36575 388 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 ALDH3B2P48448 385 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 GTF2A1P52655 376 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 PSMA6P60900 246 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 MLLT11Q13015 90 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 CDSNQ15517 529 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 TAF13Q15543 124 aa10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 TSTQ16762 297 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-225ENST00000570513 LIPNQ5VXI9 398 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms