RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 BNIP1Q12981 228 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 RIN1Q13671 783 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 FLOT2Q14254 428 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF718Q3SXZ3 478 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF362Q5T0B9 420 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 C6orf52Q5T4I8 152 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 HIST2H3PS2Q5TEC6 136 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 HIST2H3AQ71DI3 136 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 C1orf174Q8IYL3 243 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 OR10G2Q8NGC3 310 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 KLF14Q8TD94 323 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 SNX33Q8WV41 574 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 SLC7A6Q92536 515 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 DDOQ99489 341 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ELOVL3Q9HB03 270 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 GPR160Q9UJ42 338 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 POMPQ9Y244 141 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 TCRBV3S1A0A5B6 114 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 TACSTD2P09758 323 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF23P17027 643 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 GSTM3P21266 225 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 GCH1P30793 250 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ARHGDIAP52565 204 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 COX10Q12887 443 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 TMEM154Q6P9G4 183 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ARL9Q6T311 187 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 CD300LDQ6UXZ3 194 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 LNX2Q8N448 690 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 CYB561A3Q8NBI2 242 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 OR4Q3Q8NH05 313 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 RDH5Q92781 318 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 CADM1Q9BY67 442 aaKnown RBP11.12□□□□□ -0.63
CNOT1-220ENST00000569916 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 TBCCD1Q9NVR7 557 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ARMC1Q9NVT9 282 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 NKIRAS2Q9NYR9 191 aa11.12□□□□□ -0.63
CNOT1-220ENST00000569916 ZSCAN5BA6NJL1 495 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 A8MV72 311 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-220ENST00000569916 GSC2O15499 205 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 LILRA1O75019 489 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 CRLF1O75462 422 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 RP2O75695 350 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 DBHP09172 617 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 HOXB6P17509 224 aaKnown RBP11.11□□□□□ -0.63
CNOT1-220ENST00000569916 ACHEP22303 614 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 COL8A2P25067 703 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 ERFP50548 548 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF81P51508 661 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 MMP15P51511 669 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 CCL8P80075 99 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
CNOT1-220ENST00000569916 TEKQ02763 1124 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 TRIP10Q15642 601 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 MOGQ16653 247 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 PCGF3Q3KNV8 242 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 CYB5R2Q6BCY4 276 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 SLC18B1Q6NT16 456 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 CORO6Q6QEF8 472 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 CFAP77Q6ZQR2 320 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 SLC37A3Q8NCC5 494 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 GIPC3Q8TF64 312 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 FEVQ99581 238 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 COQ7Q99807 217 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 SOX7Q9BT81 388 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 HDHD2Q9H0R4 259 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 MRPL22Q9NWU5 206 aaKnown RBP11.11□□□□□ -0.63
CNOT1-220ENST00000569916 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
CNOT1-220ENST00000569916 MALRD1Q5VYJ5 2156 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 LRP5LA4QPB2 252 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 FKBP6O75344 327 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 MT-ND5P03915 603 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 ADH4P08319 380 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 PYCR1P32322 319 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 GGT2P36268 569 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 GZMKP49863 264 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 CHN2P52757 468 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 PSG7Q13046 419 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 CRMP1Q14194 572 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 LYPD4Q6UWN0 246 aa11.1□□□□□ -0.63
CNOT1-220ENST00000569916 PAPD5Q8NDF8 572 aaKnown RBP11.1□□□□□ -0.63
CNOT1-220ENST00000569916 PROKR2Q8NFJ6 384 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms