RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 POM121CA8CG34 1229 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 F5H5P2 479 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 CLDN34H7C241 214 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 SGCEO43556 437 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 KNG1P01042 644 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 KITLGP21583 273 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 GPR4P46093 362 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 MTNR1AP48039 350 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 SLC9A3P48764 834 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 PCBD1P61457 104 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 SF3A3Q12874 501 aaKnown RBP eCLIP10.08□□□□□ -0.8
CAPN3-220ENST00000569827 FHL1Q13642 323 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 NANOGP8Q6NSW7 305 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 C16orf87Q6PH81 154 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 NRMQ8IXM6 262 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 LIPHQ8WWY8 451 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 DACT3Q96B18 629 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-220ENST00000569827 UPRTQ96BW1 309 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 BPIFA2Q96DR5 249 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 Q96M85 177 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 CCT8L2Q96SF2 557 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 TMEM246Q9BRR3 403 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 CDADC1Q9BWV3 514 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 CHIAQ9BZP6 476 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 TMEM165Q9HC07 324 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 IL19Q9UHD0 177 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 NDRG4Q9ULP0 352 aaKnown RBP10.08□□□□□ -0.8
CAPN3-220ENST00000569827 A4GNTQ9UNA3 340 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 LRCH1Q9Y2L9 728 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 SNX13Q9Y5W8 968 aa10.08□□□□□ -0.8
CAPN3-220ENST00000569827 NPIPB13A6NJU9 1138 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 C12orf71A8MTZ7 269 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 FXYD1O00168 92 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 MLNRO43193 412 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 HLA-DPB1P04440 258 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 SFTPBP07988 381 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 CTLA4P16410 223 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 ZNF26P17031 533 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-220ENST00000569827 PMELP40967 661 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 GUCA1AP43080 201 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-220ENST00000569827 RAG2P55895 527 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 FGF12P61328 243 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 GUCY1A3Q02108 690 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 CYBRD1Q53TN4 286 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 MESTQ5EB52 335 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 SLC27A4Q6P1M0 643 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 TBPL2Q6SJ96 375 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 BTNL3Q6UXE8 466 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 C17orf107Q6ZR85 190 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 ZER1Q7Z7L7 766 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 CALHM3Q86XJ0 350 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 NPEPL1Q8NDH3 523 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 DYDC1Q8WWB3 177 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 RAB40AQ8WXH6 277 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 RASD2Q96D21 266 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 MEGF10Q96KG7 1140 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 PKP2Q99959 881 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 NUDT16L1Q9BRJ7 211 aaKnown RBP10.07□□□□□ -0.8
CAPN3-220ENST00000569827 MAN2C1Q9NTJ4 1040 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 TBCCD1Q9NVR7 557 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 C1RLQ9NZP8 487 aa10.07□□□□□ -0.8
CAPN3-220ENST00000569827 A0A0G2JK05 382 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 GMNCA6NCL1 334 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 EFCAB9A8MZ26 197 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 C22orf46C9J442 243 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 NR2C1P13056 603 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 RPL4P36578 427 aaKnown RBP10.06□□□□□ -0.8
CAPN3-220ENST00000569827 PITPNBP48739 271 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 SCRN3Q0VDG4 424 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 MEP1BQ16820 701 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-220ENST00000569827 TTMPQ5BVD1 217 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 ARL9Q6T311 187 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 LRRN1Q6UXK5 716 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 C9orf139Q6ZV77 190 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 RHOUQ7L0Q8 258 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 VTCN1Q7Z7D3 282 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 MUC20Q8N307 709 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-220ENST00000569827 FITM2Q8N6M3 262 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 RASSF5Q8WWW0 418 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 HAVCR1Q96D42 359 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 NEIL1Q96FI4 390 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-220ENST00000569827 PRRC1Q96M27 445 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 ECSITQ9BQ95 431 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 PCGF1Q9BSM1 259 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 RABEP2Q9H5N1 569 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 ASH2LQ9UBL3 628 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
CAPN3-220ENST00000569827 A0A0G2JND7 137 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 TEX13CA0A0J9YWL9 993 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 A6NIZ1 184 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 SRRM5B3KS81 715 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 CDC42EP2O14613 210 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms