RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MAD2L1BPQ15013 274 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 C1orf146Q5VVC0 180 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 ABHD4Q8TB40 342 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 SLC25A40Q8TBP6 338 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 NRBF2Q96F24 287 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 TPK1Q9H3S4 243 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 TBCCD1Q9NVR7 557 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 LHFPL6Q9Y693 200 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
HERPUD1-218ENST00000569569 OR6C6A6NF89 314 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 ABHD16AO95870 558 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 DAOP14920 347 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF823P16415 610 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 PRKACGP22612 351 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 TUBG1P23258 451 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 PYCR1P32322 319 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 PPP1CBP62140 327 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 DBPQ10586 325 aaPredicted RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 ELFN2Q5R3F8 820 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 MBNL2Q5VZF2 373 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 RFPL4BQ6ZWI9 263 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 Q71RC1 249 aaPredicted RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 ASRGL1Q7L266 308 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 HS3ST5Q8IZT8 346 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 OR2AJ1Q8NGZ0 328 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 UBASH3BQ8TF42 649 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 DCLRE1CQ96SD1 692 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 RBM4Q9BWF3 364 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 KRTAP3-3Q9BYR6 98 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 KRTAP3-2Q9BYR7 98 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 OR2J1Q9GZK6 312 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 HDHD2Q9H0R4 259 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 TUBG2Q9NRH3 451 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 CMC2Q9NRP2 79 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 KCNG2Q9UJ96 466 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 GRIP1Q9Y3R0 1128 aa11.83□□□□□ -0.52
HERPUD1-218ENST00000569569 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 A0A096LNT2 108 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 RIIAD1A6NNX1 92 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 H3BSA7 217 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 CIB2O75838 187 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 MT-ND5P03915 603 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 NAT2P11245 290 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 OSMP13725 252 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF3P17036 446 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 POU1F1P28069 291 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 GRK5P34947 590 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 SLC25A1P53007 311 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 RIPPLY3P57055 190 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 LOXL1Q08397 574 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 CRMP1Q14194 572 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 CARTPTQ16568 116 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 ALKBH6Q3KRA9 238 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 SPATA46Q5T0L3 261 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 SLC27A4Q6P1M0 643 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 ATG16L2Q8NAA4 619 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF540Q8NDQ6 660 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 OR5K1Q8NHB7 308 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 DNAJC9Q8WXX5 260 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 SLC7A6Q92536 515 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 COG8Q96MW5 612 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 COQ7Q99807 217 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 HINT3Q9NQE9 182 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 MRPL22Q9NWU5 206 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 CYB5R1Q9UHQ9 305 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 AP4S1Q9Y587 144 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
HERPUD1-218ENST00000569569 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 SPI1P17947 270 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 FASP25445 335 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 FMO3P31513 532 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 GGT2P36268 569 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 LIPAP38571 399 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 MPV17P39210 176 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 RGS6P49758 472 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 BLVRAP53004 296 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms