RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 C9orf170A2RU37 121 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 H7C2Y5 167 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 M0QYG6 137 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 KLF8O95600 359 aaPredicted RBP19.38■□□□□ 0.69
SPSB3-208ENST00000566339 CTAG1AP78358 180 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 TAF13Q15543 124 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 ZNF260Q3ZCT1 412 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 PRAMEF17Q5VTA0 474 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 C17orf107Q6ZR85 190 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 GATSQ8NAP1 163 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 PATE1Q8WXA2 126 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 FAM46BQ96A09 425 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 LMF1Q96S06 567 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 RPP25Q9BUL9 199 aaKnown RBP19.38■□□□□ 0.69
SPSB3-208ENST00000566339 ABHD6Q9BV23 337 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 TMEM100Q9NV29 134 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 KLK13Q9UKR3 277 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 MKL2Q9ULH7 1088 aa19.38■□□□□ 0.69
SPSB3-208ENST00000566339 CARHSP1Q9Y2V2 147 aaKnown RBP19.38■□□□□ 0.69
SPSB3-208ENST00000566339 MRPS18BQ9Y676 258 aaKnown RBP19.38■□□□□ 0.69
SPSB3-208ENST00000566339 A0A0B4J2A0 478 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 A6NIZ1 184 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 SLC25A12O75746 678 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 DUS4LO95620 317 aaKnown RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 SPARCP09486 303 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 HSD11B1P28845 292 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 CX3CR1P49238 355 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 HOXA1P49639 335 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 RAP1BP61224 184 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 RAP1AP62834 184 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 HHEXQ03014 270 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 GLO1Q04760 184 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 ACKR1Q16570 336 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 PCK2Q16822 640 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 UQCC2Q9BRT2 126 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 WDR13Q9H1Z4 485 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 SHPKQ9UHJ6 478 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 VSIG4Q9Y279 399 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 LRP12Q9Y561 859 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 ARHGEF17Q96PE2 2063 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 SCN2AQ99250 2005 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 NPIPB13A6NJU9 1138 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 C17orf105B2RV13 164 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 NPIPB4C9JG80 1138 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 TO15178 435 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 LINC01565O15544 149 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 NPIPB7O75200 414 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 ALOX12BO75342 701 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 FBXO45P0C2W1 286 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 GP1BBP13224 206 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 TPT1P13693 172 aaKnown RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 MRPS21P82921 87 aaKnown RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 INSM1Q01101 510 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 DLX2Q07687 328 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 EIF2B1Q14232 305 aaKnown RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 ODF4Q2M2E3 257 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 DEFB110Q30KQ9 67 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 SLC30A7Q8NEW0 376 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 MRGPRX1Q96LB2 322 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 NMES1Q9C002 83 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 UCK1Q9HA47 277 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 ZNF230Q9UIE0 474 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 GDF2Q9UK05 429 aaPredicted RBP19.37■□□□□ 0.69
SPSB3-208ENST00000566339 RHBDD3Q9Y3P4 386 aa19.37■□□□□ 0.69
SPSB3-208ENST00000566339 TEX13DA0A0J9YY54 714 aaPredicted RBP19.36■□□□□ 0.69
SPSB3-208ENST00000566339 PRAMEF26H0Y7S4 382 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 BPNT1O95861 308 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 MAOAP21397 527 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 LTBRP36941 435 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 POLR2HP52434 150 aaKnown RBP19.36■□□□□ 0.69
SPSB3-208ENST00000566339 MFGE8Q08431 387 aaPredicted RBP19.36■□□□□ 0.69
SPSB3-208ENST00000566339 ELP2Q6IA86 826 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 OR13C3Q8NGS6 347 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 CMKLR1Q99788 373 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 PTDSS2Q9BVG9 487 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 HEATR5AQ86XA9 2040 aa19.36■□□□□ 0.69
SPSB3-208ENST00000566339 FITM1A5D6W6 292 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 ALG1L2C9J202 215 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 OR2T1O43869 369 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 SLC16A7O60669 478 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 HOXB1P14653 301 aaPredicted RBP19.35■□□□□ 0.69
SPSB3-208ENST00000566339 MAOBP27338 520 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 PPP1CAP62136 330 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 CXADRP78310 365 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 ZNF117Q03924 483 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 FAM189A2Q15884 450 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 MICBQ29980 383 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 ACTBL2Q562R1 376 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 C3orf33Q6P1S2 294 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 ARL11Q969Q4 196 aa19.35■□□□□ 0.69
SPSB3-208ENST00000566339 TSNAXQ99598 290 aaKnown RBP19.35■□□□□ 0.69
SPSB3-208ENST00000566339 NXF5Q9H1B4 397 aaKnown RBP19.35■□□□□ 0.69
SPSB3-208ENST00000566339 TP53BP1Q12888 1972 aaPredicted RBP19.35■□□□□ 0.69
SPSB3-208ENST00000566339 FAM74A7A6NL05 159 aa19.34■□□□□ 0.69
SPSB3-208ENST00000566339 DBX1A6NMT0 343 aa19.34■□□□□ 0.69
SPSB3-208ENST00000566339 OR2AT4A6NND4 320 aa19.34■□□□□ 0.69
SPSB3-208ENST00000566339 A8MVM7 634 aa19.34■□□□□ 0.69
SPSB3-208ENST00000566339 F5H0A9 414 aaPredicted RBP19.34■□□□□ 0.69
SPSB3-208ENST00000566339 NUPL2O15504 423 aaKnown RBP19.34■□□□□ 0.69
SPSB3-208ENST00000566339 CD79AP11912 226 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms