RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 IL18R1Q13478 541 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 RAB35Q15286 201 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 OCLNQ16625 522 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 SMN1Q16637 294 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 LCN1P1Q5VSP4 162 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 TTC23Q5W5X9 447 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 TMEM53Q6P2H8 277 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 MEPCEQ7L2J0 689 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 DPY19L4Q7Z388 723 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 DCXRQ7Z4W1 244 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 CDC20BQ86Y33 519 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 SLC30A7Q8NEW0 376 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 OR10H5Q8NGA6 315 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 OR6N2Q8NGY6 317 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 CNIH3Q8TBE1 160 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 SMAP2Q8WU79 429 aaPredicted RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 TRUB1Q8WWH5 349 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 NEUROG1Q92886 237 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 POM121L2Q96KW2 1035 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 CNN2Q99439 309 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 TEAD3Q99594 435 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 WACQ9BTA9 647 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 VCX3BQ9H321 246 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 ESRP2Q9H6T0 727 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 NGBQ9NPG2 151 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 DDX28Q9NUL7 540 aaKnown RBP7.07□□□□□ -1.28
CDH13-208ENST00000566333 HAO2Q9NYQ3 351 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 ATPIF1Q9UII2 106 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 FBXL3Q9UKT7 428 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 COPS3Q9UNS2 423 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 RNF115Q9Y4L5 304 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 TIMM10BQ9Y5J6 103 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 ITPR3Q14573 2671 aa7.07□□□□□ -1.28
CDH13-208ENST00000566333 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 CREBBPQ92793 2442 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 J3QRE1 110 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 ZNF593O00488 134 aaPredicted RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 CASKO14936 926 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 ICMTO60725 284 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 APOL3O95236 402 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 CD3EP07766 207 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 DBHP09172 617 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 SBK2P0C263 348 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 COX5BP10606 129 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 CCL2P13500 99 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 STOMP27105 288 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 WNT5AP41221 380 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 GUCA1AP43080 201 aaPredicted RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 HTR5AP47898 357 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 TLE4Q04727 773 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 MSMPQ1L6U9 139 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 RSPO1Q2MKA7 263 aaPredicted RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 ELFN2Q5R3F8 820 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 ZNF704Q6ZNC4 412 aaPredicted RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 RFPL4BQ6ZWI9 263 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 SHFQ7M4L6 423 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 SLC16A9Q7RTY1 509 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 ZNF555Q8NEP9 628 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 OTOSQ8NHW6 89 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 RNF133Q8WVZ7 376 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 SLC7A6Q92536 515 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 COQ7Q99807 217 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 APOL4Q9BPW4 351 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 RHNO1Q9BSD3 238 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 ANKRD60Q9BZ19 345 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 HDHD2Q9H0R4 259 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 KCNN2Q9H2S1 579 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 CLEC4MQ9H2X3 399 aaPredicted RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 C1orf198Q9H425 327 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 PLEKHF2Q9H8W4 249 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 RNF121Q9H920 327 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 PLEK2Q9NYT0 353 aa7.06□□□□□ -1.28
CDH13-208ENST00000566333 WARS2Q9UGM6 360 aaKnown RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 PRRC2AP48634 2157 aaKnown RBP7.06□□□□□ -1.28
CDH13-208ENST00000566333 GPRIN2O60269 458 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 MPZL2O60487 215 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 SMPD2O60906 423 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 ADRA2AP08913 450 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 DBTP11182 482 aaKnown RBP7.05□□□□□ -1.28
CDH13-208ENST00000566333 ZNF823P16415 610 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 ALOX5APP20292 161 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 SSTR2P30874 369 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 OPRL1P41146 370 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 SLC15A1P46059 708 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 HCCSP53701 268 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 IL5RAQ01344 420 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 TMED1Q13445 227 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 EIF2B1Q14232 305 aaKnown RBP7.05□□□□□ -1.28
CDH13-208ENST00000566333 TBC1D28Q2M2D7 210 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
CDH13-208ENST00000566333 TMEM255AQ5JRV8 349 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 MEDAGQ5VYS4 303 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 TMEM154Q6P9G4 183 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 SSX6Q7RTT6 188 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 SLC35F2Q8IXU6 374 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 ZNF101Q8IZC7 436 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 C8orf59Q8N0T1 100 aaPredicted RBP7.05□□□□□ -1.28
CDH13-208ENST00000566333 SETD9Q8NE22 299 aa7.05□□□□□ -1.28
CDH13-208ENST00000566333 NUP37Q8NFH4 326 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms