RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CDADC1Q9BWV3 514 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 PLK3Q9H4B4 646 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 MARCH7Q9H992 704 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 TVP23BQ9NYZ1 205 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 CMAHPQ9Y471 501 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 ORC6Q9Y5N6 252 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 HIVEP1P15822 2718 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 F8P00451 2351 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 GPRIN2O60269 458 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 ENTPD1P49961 510 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 RAD23AP54725 363 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 EFNB1P98172 346 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 SLC35D3Q5M8T2 416 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 ELFN2Q5R3F8 820 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 CORO6Q6QEF8 472 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 ARL9Q6T311 187 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 SPNS3Q6ZMD2 512 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 CPOQ8IVL8 374 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 CBR4Q8N4T8 237 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 OR2AJ1Q8NGZ0 328 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 OR1F12Q8NHA8 337 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 TRMT61AQ96FX7 289 aaKnown RBP18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 MED20Q9H944 212 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 EIF3KQ9UBQ5 218 aaKnown RBP18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 GDF2Q9UK05 429 aaPredicted RBP18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 ITGB1BP2Q9UKP3 347 aa18.14■□□□□ 0.5
SHCBP1-205ENST00000566016 CHD3Q12873 2000 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 J3QW42 95 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 CCNOP22674 350 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 SLC2A5P22732 501 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 WNT5AP41221 380 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 SNRPD2P62316 118 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 ECH1Q13011 328 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 LYPD4Q6UWN0 246 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 CFAP77Q6ZQR2 320 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 CXXC5Q7LFL8 322 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 ZNF101Q8IZC7 436 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 OTULINQ96BN8 352 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 DCLRE1CQ96SD1 692 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 WDR76Q9H967 626 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 ELOVL3Q9HB03 270 aa18.14■□□□□ 0.49
SHCBP1-205ENST00000566016 VPS13CQ709C8 3753 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 TVP23AA6NH52 213 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 ANKRD65E5RJM6 399 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 H3BSA7 217 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 PRKYO43930 277 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 FAM157BP0CG42 384 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 RGS7BPQ6MZT1 257 aaPredicted RBP18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 PRSS57Q6UWY2 283 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 LINC00346Q8IVM7 164 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 ZNF511Q8NB15 262 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 EME1Q96AY2 570 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 C4orf45Q96LM5 186 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 CACNG6Q9BXT2 260 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 OR51V1Q9H2C8 321 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 PNRC2Q9NPJ4 139 aaKnown RBP18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 DDX28Q9NUL7 540 aaKnown RBP18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 TBCCD1Q9NVR7 557 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 PMF1-BGLAPU3KQ54 211 aa18.13■□□□□ 0.49
SHCBP1-205ENST00000566016 BAG2O95816 211 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 ZNF250P15622 560 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 TUBG1P23258 451 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 GSTT1P30711 240 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 MSMPQ1L6U9 139 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 KRTAP27-1Q3LI81 207 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 SHEQ5VZ18 495 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 TIGD4Q8IY51 512 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 PERPQ96FX8 193 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 MAP6Q96JE9 813 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 INTS14Q96SY0 518 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 ATF6BQ99941 703 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 RIBC2Q9H4K1 309 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 TUBG2Q9NRH3 451 aa18.12■□□□□ 0.49
SHCBP1-205ENST00000566016 IGLV3-9A0A075B6K5 115 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 TMEM129A0AVI4 362 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 ABHD16AO95870 558 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 POLR2IP36954 125 aaKnown RBP18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 CDKN1AP38936 164 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 RGS6P49758 472 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 PPOXP50336 477 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 ATP5J2P56134 94 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 RCN1Q15293 331 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 ZBTB49Q6ZSB9 765 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 RFPL4BQ6ZWI9 263 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 KRTAP1-3Q8IUG1 177 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 TMEM163Q8TC26 289 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 HRASLS5Q96KN8 279 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 COG8Q96MW5 612 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 PITX2Q99697 317 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 DOK1Q99704 481 aa18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 MRPL37Q9BZE1 423 aaKnown RBP18.11■□□□□ 0.49
SHCBP1-205ENST00000566016 ERICH4A6NGS2 130 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 E9PQ18 207 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 ZNF593O00488 134 aaPredicted RBP18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 LCKP06239 509 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 SPARCP09486 303 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 PSKH1P11801 424 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 ANPEPP15144 967 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 NXNL2Q5VZ03 156 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 RHOUQ7L0Q8 258 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms