RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 DCLRE1CQ96SD1 692 aaKnown RBP17■□□□□ 0.31
CMTM3-211ENST00000565922 BPESC1Q9GZL8 116 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 CYSLTR2Q9NS75 346 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 VNN3Q9NY84 501 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 NKIRAS2Q9NYR9 191 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 KCNG2Q9UJ96 466 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 KLHL21Q9UJP4 597 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 POMPQ9Y244 141 aa17■□□□□ 0.31
CMTM3-211ENST00000565922 OR6C68A6NDL8 312 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 OR6C6A6NF89 314 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 INAFM1C9JVW0 142 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 HLA-DQA2P01906 255 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 ACHEP22303 614 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 GZMKP49863 264 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 ZMAT1Q5H9K5 638 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 CD300LDQ6UXZ3 194 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 LNX2Q8N448 690 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 OR2T4Q8NH00 348 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 OR1F12Q8NHA8 337 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 TEX47Q8TBZ9 253 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 KLF14Q8TD94 323 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-211ENST00000565922 RDH5Q92781 318 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 CDADC1Q9BWV3 514 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 TSSK6Q9BXA6 273 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 PLA2G12AQ9BZM1 189 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 OR2J1Q9GZK6 312 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 CHODLQ9H9P2 273 aa16.99■□□□□ 0.31
CMTM3-211ENST00000565922 TCRBV3S1A0A5B6 114 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 GSC2O15499 205 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 E2F6O75461 281 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 IFNGP01579 166 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 RGS6P49758 472 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 TEKQ02763 1124 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 ALKBH6Q3KRA9 238 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 FAM209AQ5JX71 171 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 ELFN2Q5R3F8 820 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 SPATA46Q5T0L3 261 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 CYB5R2Q6BCY4 276 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-211ENST00000565922 OR2AJ1Q8NGZ0 328 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 COQ7Q99807 217 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 MMADHCQ9H3L0 296 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-211ENST00000565922 GRIP1Q9Y3R0 1128 aa16.98■□□□□ 0.31
CMTM3-211ENST00000565922 FN1P02751 2386 aaKnown RBP16.97■□□□□ 0.31
CMTM3-211ENST00000565922 NIPBLQ6KC79 2804 aaeCLIP16.97■□□□□ 0.31
CMTM3-211ENST00000565922 RER1O15258 196 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 SOX14O95416 240 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 ZNF823P16415 610 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 ZNF23P17027 643 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 ZNF81P51508 661 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 CHN2P52757 468 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 HIST1H3AP68431 136 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 RIN1Q13671 783 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 MEP1BQ16820 701 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 CCDC92Q53HC0 331 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-211ENST00000565922 C6orf52Q5T4I8 152 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 HIST2H3PS2Q5TEC6 136 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 HIST2H3AQ71DI3 136 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 PROKR2Q8NFJ6 384 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 OR5L1Q8NGL2 311 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 OR8D4Q8NGM9 314 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 FEVQ99581 238 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 CADM1Q9BY67 442 aaKnown RBP16.97■□□□□ 0.31
CMTM3-211ENST00000565922 FN3KQ9H479 309 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 ZNF556Q9HAH1 456 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 YAE1D1Q9NRH1 226 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 DECR2Q9NUI1 292 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 LHFPL6Q9Y693 200 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 TANC2Q9HCD6 1990 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 NF1P21359 2839 aa16.97■□□□□ 0.31
CMTM3-211ENST00000565922 IGHV4-61A0A0C4DH41 118 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 A8MV72 311 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-211ENST00000565922 GPANK1O95872 356 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 NGFP01138 241 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 HPXP02790 462 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 TACSTD2P09758 323 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 ZNF3P17036 446 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 CBX1P83916 185 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 ECH1Q13011 328 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 OTPQ5XKR4 325 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 DIRC2Q96SL1 478 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 ARMC1Q9NVT9 282 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 PDP1Q9P0J1 537 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-211ENST00000565922 DNAJB9Q9UBS3 223 aa16.96■□□□□ 0.31
CMTM3-211ENST00000565922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.95■□□□□ 0.34e-6■■□□□ 13.3
CMTM3-211ENST00000565922 RIIAD1A6NNX1 92 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 H3BN98 237 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 TPD52L2O43399 206 aaKnown RBP16.95■□□□□ 0.3
CMTM3-211ENST00000565922 TIMM8AO60220 97 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-211ENST00000565922 FKBP6O75344 327 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 NCR1O76036 304 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 TFP02787 698 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 MPV17P39210 176 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 MAGEB1P43366 347 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 BLVRAP53004 296 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 TMEM33P57088 247 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 SLC18B1Q6NT16 456 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 CYB561A3Q8NBI2 242 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 SLC37A3Q8NCC5 494 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 PAPD5Q8NDF8 572 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms