RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SDHAP31040 664 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 RBMXP38159 391 aaKnown RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 IFNGR2P38484 337 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 OMPP47874 163 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 ACTG1P63261 375 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 MXRA7P84157 204 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 AQP6Q13520 282 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 KRR1Q13601 381 aaKnown RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 SEC23BQ15437 767 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 MEP1BQ16820 701 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 RFX4Q33E94 735 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 CCDC92Q53HC0 331 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 TMEM255AQ5JRV8 349 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 SLC27A4Q6P1M0 643 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 C8orf82Q6P1X6 216 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 DNM1P34Q6PK57 102 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 CORO6Q6QEF8 472 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 SMARCD3Q6STE5 483 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 RBMS3Q6XE24 437 aaKnown RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 C1orf229Q6ZS94 237 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 FOXL2NBQ6ZUU3 175 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 VASH1Q7L8A9 365 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 FAM122BQ7Z309 247 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 JAZF1Q86VZ6 243 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 BPIFB2Q8N4F0 458 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 KLHL36Q8N4N3 616 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 FAM156AQ8NDB6 213 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 GJC3Q8NFK1 279 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 OR2AJ1Q8NGZ0 328 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 OR4K13Q8NH42 304 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 C22orf15Q8WYQ4 148 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 SLC7A6Q92536 515 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 GCDHQ92947 438 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 RSRC1Q96IZ7 334 aaKnown RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 C7orf34Q96L11 122 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 ZNF582Q96NG8 517 aaPredicted RBP5.43□□□□□ -1.54
TCF4-228ENST00000565393 TSSK2Q96PF2 358 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 JMJD8Q96S16 334 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 CDRT15Q96T59 188 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 PITX2Q99697 317 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 IFT27Q9BW83 186 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 TMPRSS13Q9BYE2 586 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 MYLK2Q9H1R3 596 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 POFUT1Q9H488 388 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 GORASP2Q9H8Y8 452 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 SPAG4Q9NPE6 437 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 NRIP3Q9NQ35 241 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 G6PC2Q9NQR9 355 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 TMEM106BQ9NUM4 274 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 PTTG3PQ9NZH4 202 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 TMCC3Q9ULS5 477 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 PPP1R3CQ9UQK1 317 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 NPTNQ9Y639 398 aa5.43□□□□□ -1.54
TCF4-228ENST00000565393 ROS1P08922 2347 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 IGHV3-64DA0A0J9YX35 117 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR6C6A6NF89 314 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 F5H5K5 113 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR10H3O60404 316 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ICMTO60725 284 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 DEAF1O75398 565 aaPredicted RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 ZNF205O95201 554 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 PPP1R3DO95685 299 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 CD55P08174 381 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ADH4P08319 380 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 DBHP09172 617 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 RAC2P15153 192 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ZNF823P16415 610 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 KITLGP21583 273 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 GATA3P23771 443 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ZFP36P26651 326 aaKnown RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 PRDX6P30041 224 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 SLC6A6P31641 620 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 LIMS1P48059 325 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 RGS6P49758 472 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 SPIBQ01892 262 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 HLXQ14774 488 aaPredicted RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 KCNMB1Q16558 191 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 SLC36A3Q495N2 470 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 SLC35F1Q5T1Q4 408 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR2T2Q6IF00 324 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 LEG1Q6P5S2 330 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 Q6ZR03 302 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 PTCHD4Q6ZW05 846 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ADCK1Q86TW2 530 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 LRRC28Q86X40 367 aaPredicted RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR6V1Q8N148 313 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 FAM86B1Q8N7N1 296 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 C3orf56Q8N813 242 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR8G5Q8NG78 346 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR52E2Q8NGJ4 325 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 OR13G1Q8NGZ3 307 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 GNPDA2Q8TDQ7 276 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 ITLN1Q8WWA0 313 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 APOBEC3DQ96AK3 386 aaPredicted RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 NMNAT3Q96T66 252 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 GPA33Q99795 319 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 SUCNR1Q9BXA5 334 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 HCAR1Q9BXC0 346 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms