RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SEC11BP0C7V7 166 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LIMS3P0CW19 117 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LIMS4P0CW20 117 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 VSIG10L2P0DP72 767 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CCL2P13500 99 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CELP19835 753 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CR2P20023 1033 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 RAB6AP20340 208 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SDHBP21912 280 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 EDNRBP24530 442 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 AK4P27144 223 aaPredicted RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CD34P28906 385 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 KIR3DL1P43629 444 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC6A8P48029 635 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC6A11P48066 632 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CXCR3P49682 368 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 THBS3P49746 956 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 PDX1P52945 283 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 GAS1P54826 345 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 FOXA1P55317 472 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 FAM3BP58499 235 aaPredicted RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 TAS2R31P59538 309 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC6A3Q01959 620 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 TNFAIP1Q13829 316 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 GPR18Q14330 331 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 ODF4Q2M2E3 257 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 PRTGQ2VWP7 1150 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC10A6Q3KNW5 377 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CRB2Q5IJ48 1285 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SPANXN4Q5MJ08 99 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LY6G6FQ5SQ64 297 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 TMEM69Q5SWH9 247 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 MARC1Q5VT66 337 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 PRAMEF17Q5VTA0 474 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SDHAF4Q5VUM1 108 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 FAM71F2Q6NXP2 309 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LCTLQ6UWM7 567 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLCO4C1Q6ZQN7 724 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 MBOAT2Q6ZWT7 520 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 DEFB128Q7Z7B8 93 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 VASH2Q86V25 355 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SELENOHQ8IZQ5 122 aaKnown RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 FAM58AQ8N1B3 248 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 RNF149Q8NC42 400 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 FBXO22Q8NEZ5 403 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 OR5A2Q8NGI9 324 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 OR1K1Q8NGR3 316 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SPPL2AQ8TCT8 520 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 DNASE2BQ8WZ79 361 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SUSD6Q92537 303 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CXorf40BQ96DE9 158 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 VWCEQ96DN2 955 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC41A2Q96JW4 573 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 SLC6A18Q96N87 628 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LRRC3BQ96PB8 259 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 IL17FQ96PD4 163 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 CIB3Q96Q77 187 aaPredicted RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 ELOVL1Q9BW60 279 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 IKZF5Q9H5V7 419 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 GPR35Q9HC97 309 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 NOX4Q9NPH5 578 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 ACER3Q9NUN7 267 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 DNAJC27Q9NZQ0 273 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 MTFP1Q9UDX5 166 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 TBX21Q9UL17 535 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 GPR52Q9Y2T5 361 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 MRPS18BQ9Y676 258 aaKnown RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 LY75O60449 1722 aa5.7□□□□□ -1.5
PTPN9-204ENST00000564970 COL11A2P13942 1736 aaPredicted RBP5.7□□□□□ -1.5
PTPN9-204ENST00000564970 IGHV1-69-2A0A0G2JMI3 117 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 A0A1W2PPE2 198 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 ANKUB1A6NFN9 424 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 A6NNC1 897 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 SUPT3HB4E1H0 165 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 FTCDNL1E5RQL4 147 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 M0R3H8 397 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 DCTN6O00399 190 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 GAPDHSO14556 408 aaPredicted RBP5.69□□□□□ -1.5
PTPN9-204ENST00000564970 MTX2O75431 263 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 SCGNO76038 276 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 TIAF1O95411 115 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 SLC16A8O95907 504 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 MT-CO2P00403 227 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 IL2RAP01589 272 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 JCHAINP01591 159 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 TRGC2P03986 189 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 IFNW1P05000 195 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 OR13C7P0DN81 318 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 CD19P15391 556 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 ZNF19P17023 458 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 RPS4Y1P22090 263 aaKnown RBP5.69□□□□□ -1.5
PTPN9-204ENST00000564970 APLNRP35414 380 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 PPICP45877 212 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 GABRA2P47869 451 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 MVDP53602 400 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 CAV3P56539 151 aa5.69□□□□□ -1.5
PTPN9-204ENST00000564970 DCAF7P61962 342 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms