RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ITGA5P08648 1049 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 CST2P09228 141 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 HSMCR30P0CW71 290 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 CD8BP10966 210 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF19P17023 458 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 IGHV1-2P23083 117 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 GP2P55259 537 aaKnown RBP9.71□□□□□ -0.86
SF3B3-205ENST00000564899 OR12D2P58182 307 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 EGR3Q06889 387 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 AQP6Q13520 282 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 TIGD6Q17RP2 521 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 KCTD18Q6PI47 426 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-205ENST00000564899 PLEKHG7Q6ZR37 379 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 SPATC1Q76KD6 591 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF627Q7L945 461 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 SLC16A14Q7RTX9 510 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 FAM220AQ7Z4H9 259 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 SYS1Q8N2H4 156 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 OR1K1Q8NGR3 316 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 ST7LQ8TDW4 575 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 GATAD2BQ8WXI9 593 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 RND1Q92730 232 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 CCDC120Q96HB5 630 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 OR8B4Q96RC9 309 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 DMRTA2Q96SC8 542 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 SH3GL3Q99963 347 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 KCNN2Q9H2S1 579 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 C1orf198Q9H425 327 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 ISG20L2Q9H9L3 353 aaKnown RBP9.71□□□□□ -0.86
SF3B3-205ENST00000564899 Q9UFV3 132 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 GDF2Q9UK05 429 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-205ENST00000564899 GNG8Q9UK08 70 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 ABCA2Q9BZC7 2435 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 GTF3C1Q12789 2109 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 A0A096LPE4 126 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 A0A1W2PPZ6 126 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 METTL15A6NJ78 407 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 PSMD9O00233 223 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SULT1C4O75897 302 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 WNT11O96014 354 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 COX5AP20674 150 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 BMP5P22003 454 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 CAPZA2P47755 286 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 PCBD1P61457 104 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 TGFBR3Q03167 851 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ROM1Q03395 351 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SCRN3Q0VDG4 424 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MLLT11Q13015 90 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-205ENST00000564899 DOC2BQ14184 412 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 RAB39AQ14964 217 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF684Q5T5D7 378 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SYT6Q5T7P8 510 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ANKRD16Q6P6B7 361 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 LRRN1Q6UXK5 716 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 CFAP77Q6ZQR2 320 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 BEND4Q6ZU67 534 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 VASH1Q7L8A9 365 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-205ENST00000564899 GPR141Q7Z602 305 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 KRT77Q7Z794 578 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 KLBQ86Z14 1044 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SKA3Q8IX90 412 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 GABRG1Q8N1C3 465 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 YIPF7Q8N8F6 280 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF610Q8N9Z0 462 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF485Q8NCK3 441 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 GJC3Q8NFK1 279 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SLAMF6Q96DU3 332 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 FBXO17Q96EF6 278 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 COG8Q96MW5 612 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 OPALINQ96PE5 141 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MGLLQ99685 303 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MROQ9BYG7 248 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 PIGMQ9H3S5 423 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 TRIM36Q9NQ86 728 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 CENPMQ9NSP4 180 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ACOXLQ9NUZ1 547 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 BABAM2Q9NXR7 383 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 SLCO1C1Q9NYB5 712 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF629Q9UEG4 869 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MRM2Q9UI43 246 aaKnown RBP9.7□□□□□ -0.86
SF3B3-205ENST00000564899 MED12LQ86YW9 2145 aa9.7□□□□□ -0.86
SF3B3-205ENST00000564899 CIB4A0PJX0 185 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 EEF1E1-BLOC1S5C9J1V9 151 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF878C9JN71 531 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 CCL21O00585 134 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 DVL2O14641 736 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 MSTNO14793 375 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 RER1O15258 196 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 EEF1E1O43324 174 aaKnown RBP9.69□□□□□ -0.86
SF3B3-205ENST00000564899 RAD51DO75771 328 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 LYZL6O75951 148 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 ABHD16AO95870 558 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 TACSTD2P09758 323 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF32P17041 273 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 OPRL1P41146 370 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 RIDAP52758 137 aaKnown RBP9.69□□□□□ -0.86
SF3B3-205ENST00000564899 GBX2P52951 348 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-205ENST00000564899 HIST1H3AP68431 136 aa9.69□□□□□ -0.86
SF3B3-205ENST00000564899 TSTQ16762 297 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms