RNA–Protein interactions for RNA: ENST00000563984.1

VPS35-205, Transcript of VPS35, retromer complex component, humanhuman

TSL 2

Gene VPS35, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-205ENST00000563984 A8MXK9 166 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 EFCAB9A8MZ26 197 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 BLOC1S5-TXNDC5H3BN57 136 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 PPP1R2P9O14990 202 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 EPHB6O15197 1021 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 MBTPS2O43462 519 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR1F1O43749 312 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 ORC5O43913 435 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 SLC19A2O60779 497 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 WDR1O75083 606 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 HSBP1O75506 76 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 SLC25A12O75746 678 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 CPNE6O95741 557 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 GPR75O95800 540 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 ORM1P02763 201 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 SERPINA7P05543 415 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 CST2P09228 141 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 CSF3P09919 207 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 HLA-EP13747 358 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 GM2AP17900 193 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TBPP20226 339 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 CD72P21854 359 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 AZGP1P25311 298 aaKnown RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR3A1P47881 315 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 LGALS7P47929 136 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 PGGT1BP53609 377 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 PLP1P60201 277 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 STXBP1P61764 594 aaKnown RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 TBPL1P62380 186 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 DLK1P80370 383 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 ZP4Q12836 540 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TPBGQ13641 420 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TRMT5Q32P41 509 aaKnown RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 GLYR1Q49A26 553 aaPredicted RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 SCGB2B2Q4G0G5 96 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OCIAD2Q56VL3 154 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TIMM23BQ5SRD1 257 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 NCMAPQ5T1S8 102 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 FAM78BQ5VT40 261 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OTUD1Q5VV17 481 aaPredicted RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 CAPN13Q6MZZ7 669 aaPredicted RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TMPPEQ6ZT21 453 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 RASSF6Q6ZTQ3 369 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 PDZD9Q8IXQ8 264 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 MMGT1Q8N4V1 131 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR4D9Q8NGE8 314 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR9Q2Q8NGE9 314 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR6N2Q8NGY6 317 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 OR52E5Q8NH55 327 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 TMEM174Q8WUU8 243 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 HPSE2Q8WWQ2 592 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 KCNJ9Q92806 393 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 TAAR8Q969N4 342 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 MOAP1Q96BY2 351 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 C12orf42Q96LP6 360 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 HYLS1Q96M11 299 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 MUS81Q96NY9 551 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 IL4I1Q96RQ9 567 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 APOL4Q9BPW4 351 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 GPR174Q9BXC1 333 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 NKX6-2Q9C056 277 aaPredicted RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 DSN1Q9H410 356 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 KCNK15Q9H427 330 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 FAM124BQ9H5Z6 455 aaPredicted RBP4.49□□□□□ -1.69
VPS35-205ENST00000563984 ALG9Q9H6U8 611 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 AAMDCQ9H7C9 122 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 RNF122Q9H9V4 155 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 Q9N2J8 555 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 PLSCR3Q9NRY6 295 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 UFC1Q9Y3C8 167 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 U3KQ87 197 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 V9GYS6 101 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 V9GYY9 64 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 MAGI3Q5TCQ9 1506 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 ARHGEF40Q8TER5 1519 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 DISP1Q96F81 1524 aa4.49□□□□□ -1.69
VPS35-205ENST00000563984 NOS1P29475 1434 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 MADDQ8WXG6 1647 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 TBC1D3DA0A087WVF3 549 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 TBC1D3IA0A087WXS9 549 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 A0A1W2PR77 199 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 TMEM72A0PK05 275 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 ZNF840PA6NDX5 716 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 CXorf65A6NEN9 183 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 IGLON5A6NGN9 336 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 FRG2CA6NGY1 282 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 MBD3L5A6NJ08 208 aaPredicted RBP4.48□□□□□ -1.69
VPS35-205ENST00000563984 A6NNC1 897 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 TBC1D3LB9A6J9 549 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 NPIPB9F8W1W9 429 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 H0YIG0 161 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 SLC16A5O15375 505 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 SLC31A1O15431 190 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 AIREO43918 545 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 HPGDSO60760 199 aa4.48□□□□□ -1.69
VPS35-205ENST00000563984 CA11O75493 328 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms