RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 CCDC92Q53HC0 331 aaPredicted RBP26.26■■□□□ 1.79
CMTM4-204ENST00000563952 MBNL2Q5VZF2 373 aaKnown RBP26.26■■□□□ 1.79
CMTM4-204ENST00000563952 PGM2L1Q6PCE3 622 aa26.26■■□□□ 1.79
CMTM4-204ENST00000563952 AQP12AQ8IXF9 295 aa26.26■■□□□ 1.79
CMTM4-204ENST00000563952 OR1F12Q8NHA8 337 aa26.26■■□□□ 1.79
CMTM4-204ENST00000563952 CANT1Q8WVQ1 401 aa26.26■■□□□ 1.79
CMTM4-204ENST00000563952 IL20Q9NYY1 176 aa26.26■■□□□ 1.79
CMTM4-204ENST00000563952 DHRS12A0PJE2 317 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 LRP5LA4QPB2 252 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 BHLHE40O14503 412 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 CRLF1O75462 422 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 SOX14O95416 240 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 CCL8P80075 99 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 FLOT2Q14254 428 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 TMEM255AQ5JRV8 349 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 CORO6Q6QEF8 472 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 ZBTB46Q86UZ6 589 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 NPEPL1Q8NDH3 523 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 SLC26A10Q8NG04 563 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 LHFPL6Q9Y693 200 aa26.25■■□□□ 1.79
CMTM4-204ENST00000563952 OR6C6A6NF89 314 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 DNAJC8O75937 253 aaPredicted RBP26.24■■□□□ 1.79
CMTM4-204ENST00000563952 HLA-DQA2P01906 255 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 GSTM3P21266 225 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 GZMKP49863 264 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 TEKQ02763 1124 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 PCGF3Q3KNV8 242 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 SPATA24Q86W54 205 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 CYB561A3Q8NBI2 242 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 OR10G2Q8NGC3 310 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 YIPF5Q969M3 257 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 TSSK6Q9BXA6 273 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 DGCR6LQ9BY27 220 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 CHODLQ9H9P2 273 aa26.24■■□□□ 1.79
CMTM4-204ENST00000563952 GNGT2O14610 69 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 TPD52L2O43399 206 aaKnown RBP26.23■■□□□ 1.79
CMTM4-204ENST00000563952 TFP02787 698 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 ACHEP22303 614 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 ZNF81P51508 661 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 CHN2P52757 468 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 TRIP10Q15642 601 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 TSTQ16762 297 aaKnown RBP26.23■■□□□ 1.79
CMTM4-204ENST00000563952 GJC3Q8NFK1 279 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 POFUT1Q9H488 388 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 TBCCD1Q9NVR7 557 aa26.23■■□□□ 1.79
CMTM4-204ENST00000563952 SONP18583 2426 aaKnown RBP26.23■■□□□ 1.79
CMTM4-204ENST00000563952 PLSCR5A0PG75 271 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 H3BSA7 217 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 SLC36A3Q495N2 470 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 LINC00346Q8IVM7 164 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 GIPC3Q8TF64 312 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 DECR2Q9NUI1 292 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 ARMC1Q9NVT9 282 aa26.22■■□□□ 1.79
CMTM4-204ENST00000563952 SPRY3O43610 288 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 CDC14BO60729 498 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 LILRA1O75019 489 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 DBHP09172 617 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 TACSTD2P09758 323 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 PYCR1P32322 319 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 GPR6P46095 362 aaPredicted RBP26.21■■□□□ 1.79
CMTM4-204ENST00000563952 ERFP50548 548 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 PROKR2Q8NFJ6 384 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 OR4Q3Q8NH05 313 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 NIPSNAP1Q9BPW8 284 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 CDADC1Q9BWV3 514 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 ZNF275Q9NSD4 429 aaPredicted RBP26.21■■□□□ 1.79
CMTM4-204ENST00000563952 NKIRAS2Q9NYR9 191 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 POMPQ9Y244 141 aa26.21■■□□□ 1.79
CMTM4-204ENST00000563952 TIMM8AO60220 97 aaPredicted RBP26.2■■□□□ 1.78
CMTM4-204ENST00000563952 MMP15P51511 669 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 HIST1H3AP68431 136 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 MRPS11P82912 194 aaKnown RBP26.2■■□□□ 1.78
CMTM4-204ENST00000563952 COX10Q12887 443 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 GK3PQ14409 553 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 HIST2H3PS2Q5TEC6 136 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 HIST2H3AQ71DI3 136 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 LNX2Q8N448 690 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 SLC37A3Q8NCC5 494 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 MSI2Q96DH6 328 aaKnown RBP26.2■■□□□ 1.78
CMTM4-204ENST00000563952 FEVQ99581 238 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 HDHD2Q9H0R4 259 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 ATPIF1Q9UII2 106 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 STARD10Q9Y365 291 aa26.2■■□□□ 1.78
CMTM4-204ENST00000563952 LOC100289279A0A1B0GTE1 492 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 ZSCAN5BA6NJL1 495 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 IGHV1-46P01743 117 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 IL2RGP31785 369 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 BNIP1Q12981 228 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 SLC18B1Q6NT16 456 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 OR2T33Q8NG76 320 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 OR2AJ1Q8NGZ0 328 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 OR2T4Q8NH00 348 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 DDOQ99489 341 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 SOX7Q9BT81 388 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 NARFLQ9H6Q4 476 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 CYSLTR2Q9NS75 346 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 BAIAP2Q9UQB8 552 aa26.19■■□□□ 1.78
CMTM4-204ENST00000563952 PPIHO43447 177 aaKnown RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 PSG7Q13046 419 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 CCNIQ14094 377 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms