RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 APH1BQ8WW43 257 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 RNFT2Q96EX2 444 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 C14orf79Q96F83 325 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 COQ7Q99807 217 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 ATF6BQ99941 703 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 ANKRD60Q9BZ19 345 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 ADGRL4Q9HBW9 690 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 POU2F3Q9UKI9 436 aa16.33■□□□□ 0.2
RAB40C-207ENST00000563109 RPL36Q9Y3U8 105 aaKnown RBP16.33■□□□□ 0.2
RAB40C-207ENST00000563109 IGHV2OR16-5A0A0B4J2B6 119 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 OR6C6A6NF89 314 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF878C9JN71 531 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF670-ZNF695F2Z2N8 137 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 PHYHO14832 338 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 SYNGR3O43761 229 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 SBK2P0C263 348 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 CCNOP22674 350 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 TLE4Q04727 773 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 SPOCK1Q08629 439 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 TAF13Q15543 124 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF787Q6DD87 383 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 HIST2H2BCQ6DN03 193 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 CDC20BQ86Y33 519 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 THEM6Q8WUY1 208 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 SLAMF6Q96DU3 332 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 MAP6Q96JE9 813 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 HS3ST6Q96QI5 342 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 COPS4Q9BT78 406 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 CENPMQ9NSP4 180 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 SPEF1Q9Y4P9 236 aa16.32■□□□□ 0.2
RAB40C-207ENST00000563109 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 ATP6V1G2-DDX39BF2Z307 99 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 WBP4O75554 376 aaKnown RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 CTAG2O75638 210 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 DBTP11182 482 aaKnown RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 MYF6P23409 242 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 LOXP28300 417 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 ARL9Q6T311 187 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF704Q6ZNC4 412 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 OR10H4Q8NGA5 316 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 OR4F15Q8NGB8 312 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 ST7LQ8TDW4 575 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 SPTSSAQ969W0 71 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 POM121L2Q96KW2 1035 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 ABHD6Q9BV23 337 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 CLEC4MQ9H2X3 399 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 EIF3KQ9UBQ5 218 aaKnown RBP16.31■□□□□ 0.2
RAB40C-207ENST00000563109 PCDHGB1Q9Y5G3 927 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 COL12A1Q99715 3063 aa16.31■□□□□ 0.2
RAB40C-207ENST00000563109 PRR14LQ5THK1 2151 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 IRGMA1A4Y4 181 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 APOL3O95236 402 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 OR2T7P0C7T2 308 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 CCL2P13500 99 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 CALCRP30988 508 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 SLC15A1P46059 708 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ACTC1P68032 377 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ACTA1P68133 377 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 SMN1Q16637 294 aaKnown RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 KRT80Q6KB66 452 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 KCTD18Q6PI47 426 aaPredicted RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 UNQ6126/PRO20091Q6UXV3 157 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 SPATC1Q76KD6 591 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF295-AS1Q8N0V1 137 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 KBTBD8Q8NFY9 601 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 OR2T27Q8NH04 317 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 SMAP2Q8WU79 429 aaPredicted RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 IPCEF1Q8WWN9 437 aaPredicted RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ASB17Q8WXJ9 295 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 DCLRE1CQ96SD1 692 aaKnown RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 TMEM204Q9BSN7 226 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 PNRC2Q9NPJ4 139 aaKnown RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 DDX28Q9NUL7 540 aaKnown RBP16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ATP23Q9Y6H3 246 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 ADGRG4Q8IZF6 3080 aa16.3■□□□□ 0.2
RAB40C-207ENST00000563109 LOC100509620A0A075B734 347 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 FAM221AA4D161 298 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 H2BFMP0C1H6 154 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF35P13682 527 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 ALOX5APP20292 161 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 HSD11B1P28845 292 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 GRB2P62993 217 aaKnown RBP16.29■□□□□ 0.2
RAB40C-207ENST00000563109 RAB40BQ12829 278 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 KLHL22Q53GT1 634 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-207ENST00000563109 OR10S1Q8NGN2 331 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 FBLIM1Q8WUP2 373 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 RNF133Q8WVZ7 376 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 LGALS12Q96DT0 336 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 CNBD2Q96M20 576 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 TBX5Q99593 518 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 HEATR1Q9H583 2144 aaKnown RBP16.29■□□□□ 0.2
RAB40C-207ENST00000563109 AMBNQ9NP70 447 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 PKDREJQ9NTG1 2253 aa16.29■□□□□ 0.2
RAB40C-207ENST00000563109 UTP20O75691 2785 aaKnown RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 SHISA9B4DS77 424 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 FAM20BO75063 409 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 FADS2O95864 444 aaKnown RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 ABHD16AO95870 558 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms