RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KRTAP10-9P60411 292 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 TAGLNQ01995 201 aaKnown RBP6.64□□□□□ -1.35
TPM1-231ENST00000561395 ROM1Q03395 351 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 RASGEF1BQ0VAM2 473 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 EIF2B1Q14232 305 aaKnown RBP6.64□□□□□ -1.35
TPM1-231ENST00000561395 KCNMB1Q16558 191 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 C10orf128Q5T292 105 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 LIPNQ5VXI9 398 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 OTPQ5XKR4 325 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 LRFN4Q6PJG9 635 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 FAM180AQ6UWF9 173 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 IGFL3Q6UXB1 125 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 TMEM91Q6ZNR0 172 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 LINC00299Q6ZSB3 139 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 C20orf196Q8IYI0 205 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 YIPF7Q8N8F6 280 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 OR52N5Q8NH56 324 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 RNF128Q8TEB7 428 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 THEM6Q8WUY1 208 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 C11orf40Q8WZ69 217 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 ROBO4Q8WZ75 1007 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 KCTD7Q96MP8 289 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 OR8B4Q96RC9 309 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 MED18Q9BUE0 208 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 HDHD5Q9BXW7 423 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 NXF2Q9GZY0 626 aaKnown RBP6.64□□□□□ -1.35
TPM1-231ENST00000561395 PAQR5Q9NXK6 330 aaPredicted RBP6.64□□□□□ -1.35
TPM1-231ENST00000561395 SLCO1C1Q9NYB5 712 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 GLTPQ9NZD2 209 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 SPRR3Q9UBC9 169 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 IKZF2Q9UKS7 526 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 GSTK1Q9Y2Q3 226 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 UGT2A1Q9Y4X1 527 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 A3GALT2U3KPV4 340 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
TPM1-231ENST00000561395 ZNF407Q9C0G0 2248 aa6.64□□□□□ -1.35
TPM1-231ENST00000561395 TRBV2A0A0J9YWF9 115 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SLC43A1O75387 559 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 CDRT1O95170 752 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SYNGR4O95473 234 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 WNT11O96014 354 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SERPINA3P01011 423 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 IGHG3P01860 377 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 INHBBP09529 407 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 CPN1P15169 458 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ZNF24P17028 368 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 FLNAP21333 2647 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 SSTR2P30874 369 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SDC2P34741 201 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SOX6P35712 828 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 RPS19P39019 145 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 NANOS3P60323 173 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 ROR2Q01974 943 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 SRYQ05066 204 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 INSL4Q14641 139 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 MOGQ16653 247 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ZNF404Q494X3 552 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 PHYHD1Q5SRE7 291 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 FDX2Q6P4F2 183 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 KCTD18Q6PI47 426 aaPredicted RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 LRRN1Q6UXK5 716 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 FOXL2NBQ6ZUU3 175 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 DCXRQ7Z4W1 244 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ZNF679Q8IYX0 411 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ZNF295-AS1Q8N0V1 137 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 MS4A15Q8N5U1 240 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 OR10H5Q8NGA6 315 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 OR6N1Q8NGY5 312 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 MCFD2Q8NI22 146 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ABHD4Q8TB40 342 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ST7LQ8TDW4 575 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ABHD3Q8WU67 409 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 HSD17B8Q92506 261 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 GHSRQ92847 366 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 SLC25A46Q96AG3 418 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 TMEM45BQ96B21 275 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 INTS12Q96CB8 462 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 C4orf45Q96LM5 186 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ABHD6Q9BV23 337 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 BARHL1Q9BZE3 327 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 DEFB127Q9H1M4 99 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 KCNN2Q9H2S1 579 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 LDAHQ9H6V9 325 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 POLE4Q9NR33 117 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 GALNT8Q9NY28 637 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 CYB5R1Q9UHQ9 305 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 MCTS1Q9ULC4 181 aaKnown RBP6.63□□□□□ -1.35
TPM1-231ENST00000561395 EDARQ9UNE0 448 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 LRP12Q9Y561 859 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 LHFPL6Q9Y693 200 aa6.63□□□□□ -1.35
TPM1-231ENST00000561395 DNAJC13O75165 2243 aa6.62□□□□□ -1.35
TPM1-231ENST00000561395 HCFC1P51610 2035 aa6.62□□□□□ -1.35
TPM1-231ENST00000561395 PHF3Q92576 2039 aaKnown RBP6.62□□□□□ -1.35
TPM1-231ENST00000561395 NSD1Q96L73 2696 aaPredicted RBP6.62□□□□□ -1.35
TPM1-231ENST00000561395 OR4C45A6NMZ5 311 aa6.62□□□□□ -1.35
TPM1-231ENST00000561395 GPR171O14626 319 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms