RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZP3P21754 424 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 WARSP23381 471 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 AK4P27144 223 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 CHRNB4P30926 498 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FMO3P31513 532 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RCVRNP35243 200 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SERPINB5P36952 375 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 MAGEA12P43365 314 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 IDH2P48735 452 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 TGM4P49221 684 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SERPINB9P50453 376 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 CAV2P51636 162 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NKX2-5P52952 324 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 HCCSP53701 268 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR12D2P58182 307 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 BRWD1-AS2P59051 145 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ARF6P62330 175 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ARG2P78540 354 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FKBP3Q00688 224 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF92Q03936 586 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 PPIDQ08752 370 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 ELAVL2Q12926 359 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 BNIP2Q12982 314 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ASAH1Q13510 395 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 GGTLC2Q14390 218 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF266Q14584 549 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NECTIN1Q15223 517 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR7A5Q15622 319 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 LTB4RQ15722 352 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SLC1A5Q15758 541 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ATP6AP1Q15904 470 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 GUK1Q16774 197 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 IMPG1Q17R60 797 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 PIGGQ5H8A4 983 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FAM27D1Q5T7N8 215 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF626Q68DY1 528 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF57Q68EA5 555 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 FRMPD2BQ6IN97 320 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OGFOD2Q6N063 350 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SYCE2Q6PIF2 218 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 UGT2A3Q6UWM9 527 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 WDR82Q6UXN9 313 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 Q6ZSR9 355 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 LINC00336Q6ZUF6 198 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 USP50Q70EL3 339 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 TMUB2Q71RG4 321 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SMIM15Q7Z3B0 74 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RAB43Q86YS6 212 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FAM71AQ8IYT1 594 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF843Q8N446 348 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 IQCF1Q8N6M8 205 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 CCDC71LQ8N9Z2 235 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 UBAC2Q8NBM4 344 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR4F15Q8NGB8 312 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR5B17Q8NGF7 314 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR5D18Q8NGL1 313 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF519Q8TB69 540 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TEX47Q8TBZ9 253 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 IGFBPL1Q8WX77 278 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NELFBQ8WX92 580 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 C22orf15Q8WYQ4 148 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ARPC1AQ92747 370 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RORBQ92753 470 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RPL36ALQ969Q0 106 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 TESCQ96BS2 214 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 CNRIP1Q96F85 164 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 ATXN7L3BQ96GX2 97 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 KCTD7Q96MP8 289 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 Q96MT0 163 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RNF145Q96MT1 663 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RBP7Q96R05 134 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF300Q96RE9 604 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 KCNA7Q96RP8 456 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RANBP9Q96S59 729 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 P2RX4Q99571 388 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 EBNA1BP2Q99848 306 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 SH3GL3Q99963 347 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SYT15Q9BQS2 421 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NICN1Q9BSH3 213 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TMEM204Q9BSN7 226 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TMEM208Q9BTX3 173 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 POLR2J2Q9GZM3 115 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 NXF2Q9GZY0 626 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 METTL9Q9H1A3 318 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 POLR2J3Q9H1A7 115 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 UPF3AQ9H1J1 476 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 MMP28Q9H239 520 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 C6orf106Q9H6K1 298 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 RNF167Q9H6Y7 350 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 GAREM1Q9H706 876 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 CWH43Q9H720 699 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 REEP1Q9H902 201 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 IL1RAPQ9NPH3 570 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ACOT13Q9NPJ3 140 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 C8orf4Q9NR00 106 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FAM49BQ9NUQ9 324 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NLE1Q9NVX2 485 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 BABAM2Q9NXR7 383 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 DNAJC27Q9NZQ0 273 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms